Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:42175293..42177532-chr19:42178658..42181248,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10153472	1.00[EUR][1000 genomes]
rs10414811	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10418236	1.00[CEU][hapmap]
rs11083638	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11878734	1.00[CEU][hapmap]
rs11881220	1.00[EUR][1000 genomes]
rs55753848	1.00[EUR][1000 genomes]
rs56173718	1.00[EUR][1000 genomes]
rs58374389	1.00[EUR][1000 genomes]
rs7257601	1.00[CEU][hapmap]
rs73932022	1.00[EUR][1000 genomes]
rs73932024	1.00[EUR][1000 genomes]
rs73932026	1.00[EUR][1000 genomes]
rs73932031	1.00[EUR][1000 genomes]
rs73932034	1.00[EUR][1000 genomes]
rs73932035	1.00[EUR][1000 genomes]
rs73932037	1.00[EUR][1000 genomes]
rs73932045	1.00[EUR][1000 genomes]
rs73932082	1.00[EUR][1000 genomes]
rs73932086	1.00[EUR][1000 genomes]
rs8104370	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8105464	1.00[LWK][hapmap];0.84[MKK][hapmap];0.95[YRI][hapmap];0.91[AFR][1000 genomes]
rs8109838	1.00[CEU][hapmap]
rs9653098	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9989667	1.00[CEU][hapmap];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3319146	chr19:42082639-42212929	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	esv3319147	chr19:42082742-42212770	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	esv3422975	chr19:42106166-42212774	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv522854	chr19:42120283-42931004	Weak transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:42174800-42181800	Weak transcription	Colonic Mucosa	Colon
2	chr19:42178600-42185800	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr19:42179800-42181200	Weak transcription	Rectal Mucosa Donor 29	rectum

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