The 2.0 version of rSNPBase

Variant report

Variant rs11883104
Chromosome Location chr19:41923799-41923800
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41904600-41924800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr19:41905000-41924800 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr19:41905000-41930800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr19:41905200-41926600 Weak transcription Small Intestine intestine
5 chr19:41913600-41925800 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr19:41913800-41927000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr19:41913800-41932600 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr19:41915200-41932600 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr19:41915400-41932800 Weak transcription Hela-S3 cervix
10 chr19:41915600-41932800 Weak transcription NH-A brain
11 chr19:41916000-41924200 Strong transcription Fetal Adrenal Gland Adrenal Gland
12 chr19:41916000-41932000 Strong transcription Fetal Stomach stomach
13 chr19:41916000-41932400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr19:41916200-41926200 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr19:41916200-41927000 Strong transcription Placenta Placenta
16 chr19:41916200-41928000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr19:41916200-41932000 Weak transcription HUVEC blood vessel
18 chr19:41916400-41925000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr19:41916400-41925200 Strong transcription Liver Liver
20 chr19:41916400-41928400 Weak transcription K562 blood
21 chr19:41916400-41930800 Strong transcription Primary T helper cells fromperipheralblood blood
22 chr19:41916400-41931600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr19:41916400-41932000 Strong transcription Primary T helper naive cells fromperipheralblood blood
24 chr19:41916400-41932600 Strong transcription Primary B cells from peripheral blood blood
25 chr19:41916400-41932800 Strong transcription Brain Germinal Matrix brain
26 chr19:41916400-41932800 Strong transcription Fetal Brain Female brain
27 chr19:41916400-41933000 Strong transcription Thymus Thymus
28 chr19:41916600-41925200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr19:41916600-41925600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr19:41916600-41926800 Strong transcription Fetal Thymus thymus
31 chr19:41916600-41929600 Strong transcription Colon Smooth Muscle Colon
32 chr19:41916600-41930200 Strong transcription Primary T cells fromperipheralblood blood
33 chr19:41916600-41930800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr19:41916600-41931200 Strong transcription Rectal Smooth Muscle rectum
35 chr19:41916600-41931400 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr19:41916800-41925600 Strong transcription Primary hematopoietic stem cells short term culture blood
37 chr19:41916800-41925800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr19:41916800-41926000 Strong transcription Stomach Smooth Muscle stomach
39 chr19:41916800-41926600 Strong transcription Sigmoid Colon Sigmoid Colon
40 chr19:41916800-41930600 Strong transcription Duodenum Smooth Muscle Duodenum
41 chr19:41916800-41932200 Strong transcription Primary T cells from cord blood blood
42 chr19:41916800-41932200 Strong transcription Ovary ovary
43 chr19:41917000-41927200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr19:41917000-41932000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr19:41917800-41924800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr19:41917800-41924800 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr19:41918200-41925000 Weak transcription HMEC breast
48 chr19:41918200-41927600 Strong transcription Brain Anterior Caudate brain
49 chr19:41918200-41932000 Weak transcription NHEK skin
50 chr19:41918200-41932200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015