The 2.0 version of rSNPBase

Variant report

Variant rs11886337
Chromosome Location chr2:33440899-33440900
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33403800-33489800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:33409200-33441600 Weak transcription Psoas Muscle Psoas
3 chr2:33414600-33455400 Weak transcription Fetal Stomach stomach
4 chr2:33415200-33441600 Weak transcription Fetal Muscle Trunk muscle
5 chr2:33415400-33441600 Weak transcription Fetal Muscle Leg muscle
6 chr2:33434200-33442200 Enhancers HUVEC blood vessel
7 chr2:33435800-33444400 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr2:33436000-33441000 Enhancers Stomach Smooth Muscle stomach
9 chr2:33436400-33442200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr2:33436600-33441600 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr2:33436600-33444200 Weak transcription Brain Hippocampus Middle brain
12 chr2:33436800-33443800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
13 chr2:33436800-33455000 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr2:33437200-33443400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr2:33437400-33444200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr2:33437600-33441200 Weak transcription HSMMtube muscle
17 chr2:33437600-33441600 Weak transcription Liver Liver
18 chr2:33437800-33442200 Enhancers NH-A brain
19 chr2:33437800-33444400 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr2:33437800-33444600 Weak transcription Hela-S3 cervix
21 chr2:33437800-33445200 Weak transcription Fetal Kidney kidney
22 chr2:33438000-33443000 Enhancers A549 lung
23 chr2:33438200-33441600 Weak transcription Esophagus oesophagus
24 chr2:33439000-33442000 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr2:33439200-33442800 Enhancers Left Ventricle heart
26 chr2:33439400-33442200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:33439400-33442400 Enhancers HMEC breast
28 chr2:33439600-33441000 Weak transcription Gastric stomach
29 chr2:33439600-33442400 Enhancers NHDF-Ad bronchial
30 chr2:33439600-33442800 Enhancers Muscle Satellite Cultured Cells --
31 chr2:33439800-33441600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr2:33439800-33441600 Weak transcription Pancreas Pancrea
33 chr2:33439800-33441600 Weak transcription Right Ventricle heart
34 chr2:33439800-33441800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr2:33439800-33442200 Enhancers Fetal Heart heart
36 chr2:33439800-33442800 Enhancers Osteobl bone
37 chr2:33439800-33444400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr2:33440000-33441000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr2:33440000-33441400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr2:33440000-33441400 Weak transcription Colon Smooth Muscle Colon
41 chr2:33440000-33441600 Weak transcription Fetal Lung lung
42 chr2:33440000-33442200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr2:33440000-33442800 Enhancers NHEK skin
44 chr2:33440000-33444400 Weak transcription K562 blood
45 chr2:33440200-33441000 Enhancers Skeletal Muscle Male skeletal muscle
46 chr2:33440200-33442200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr2:33440400-33441000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr2:33440400-33441200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr2:33440400-33441800 Weak transcription Rectal Smooth Muscle rectum
50 chr2:33440400-33442200 Enhancers Lung lung

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Last update: Aug 31, 2015