Variant report

Variant rs11889163
Chromosome Location chr2:134004445-134004446
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:133991600-134005400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:133994000-134023600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr2:133998400-134005000 Weak transcription Psoas Muscle Psoas
4 chr2:133998400-134005800 Weak transcription Left Ventricle heart
5 chr2:133998800-134004600 Weak transcription Fetal Heart heart
6 chr2:133998800-134013000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr2:133998800-134014800 Weak transcription Fetal Stomach stomach
8 chr2:133999000-134005000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr2:133999200-134005400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr2:133999200-134007800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr2:133999400-134005200 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr2:133999400-134005200 Weak transcription Brain Cingulate Gyrus brain
13 chr2:133999400-134005200 Weak transcription Fetal Muscle Leg muscle
14 chr2:133999400-134005400 Weak transcription Ovary ovary
15 chr2:133999400-134005800 Weak transcription Lung lung
16 chr2:134000200-134005400 Weak transcription NHLF lung
17 chr2:134001200-134005200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr2:134001200-134005800 Weak transcription Right Ventricle heart
19 chr2:134002200-134004800 Weak transcription HMEC breast
20 chr2:134003200-134004600 Enhancers Fetal Brain Male brain
21 chr2:134003600-134004600 Enhancers Fetal Brain Female brain
22 chr2:134003600-134006000 Enhancers Fetal Lung lung
23 chr2:134003600-134006400 Enhancers Brain Substantia Nigra brain
24 chr2:134003800-134005600 Weak transcription Brain Hippocampus Middle brain
25 chr2:134003800-134006200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:134003800-134010400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr2:134004000-134004600 Weak transcription Brain Angular Gyrus brain
28 chr2:134004200-134007400 Enhancers Brain Anterior Caudate brain
29 chr2:134004400-134005600 Weak transcription Skeletal Muscle Male skeletal muscle

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