Variant report

Variant rs11915975
Chromosome Location chr3:155270504-155270505
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:155230600-155271400 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr3:155232200-155274000 Weak transcription Pancreas Pancrea
3 chr3:155241800-155273000 Weak transcription Duodenum Mucosa Duodenum
4 chr3:155253600-155273600 Weak transcription Gastric stomach
5 chr3:155257000-155289600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr3:155259400-155284800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr3:155259400-155289800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr3:155259600-155271400 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr3:155259800-155278000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr3:155260000-155271600 Weak transcription Fetal Intestine Small intestine
11 chr3:155260000-155278200 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr3:155260200-155302600 Weak transcription H1 Cell Line embryonic stem cell
13 chr3:155264200-155272800 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr3:155264400-155282200 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr3:155265800-155273000 Strong transcription HUES64 Cell Line embryonic stem cell
16 chr3:155266000-155277800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr3:155266200-155287200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr3:155266400-155271200 Weak transcription A549 lung
19 chr3:155266400-155271400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr3:155266800-155272200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr3:155266800-155274400 Weak transcription Lung lung
22 chr3:155267800-155271600 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr3:155267800-155278000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr3:155267800-155278000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr3:155268000-155271400 Weak transcription Primary T cells from cord blood blood
26 chr3:155268000-155279800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr3:155268600-155270600 Enhancers Fetal Thymus thymus
28 chr3:155268600-155271600 Transcr. at gene 5' and 3' Dnd41 blood
29 chr3:155268800-155272200 Weak transcription Fetal Kidney kidney
30 chr3:155268800-155272800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr3:155269400-155271400 Weak transcription HMEC breast
32 chr3:155269600-155271000 Genic enhancers Primary hematopoietic stem cells short term culture blood
33 chr3:155269600-155271400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr3:155269600-155271600 Enhancers Primary neutrophils fromperipheralblood blood
35 chr3:155270200-155270600 Active TSS Thymus Thymus
36 chr3:155270200-155272000 Strong transcription Fetal Intestine Large intestine
37 chr3:155270200-155272400 Strong transcription iPS-20b Cell Line embryonic stem cell
38 chr3:155270400-155274600 Enhancers Primary hematopoietic stem cells blood
39 chr3:155270400-155276800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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