Variant report

Variant rs11930689
Chromosome Location chr4:87661122-87661123
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:87631200-87712200 Weak transcription Aorta Aorta
2 chr4:87635200-87737400 Weak transcription Fetal Brain Male brain
3 chr4:87636400-87683800 Weak transcription Stomach Smooth Muscle stomach
4 chr4:87637200-87661200 Weak transcription Pancreas Pancrea
5 chr4:87639200-87688000 Weak transcription Fetal Intestine Large intestine
6 chr4:87639400-87739200 Weak transcription A549 lung
7 chr4:87641800-87683400 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr4:87642200-87692600 Weak transcription NH-A brain
9 chr4:87642400-87735800 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr4:87642600-87661200 Weak transcription Brain Germinal Matrix brain
11 chr4:87642600-87692400 Weak transcription Colon Smooth Muscle Colon
12 chr4:87642600-87697600 Weak transcription Brain Angular Gyrus brain
13 chr4:87642600-87719200 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr4:87644400-87661200 Weak transcription Osteobl bone
15 chr4:87644600-87680600 Weak transcription NHLF lung
16 chr4:87650400-87677400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr4:87651800-87676400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr4:87652000-87661200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr4:87652000-87661600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr4:87652600-87670000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr4:87653000-87661200 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr4:87655000-87661200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr4:87655600-87704400 Weak transcription Hela-S3 cervix
24 chr4:87657200-87665800 Weak transcription Adipose Nuclei Adipose
25 chr4:87658200-87664400 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr4:87658400-87662800 Weak transcription NHDF-Ad bronchial
27 chr4:87658600-87661200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr4:87658600-87664600 Weak transcription Muscle Satellite Cultured Cells --
29 chr4:87659000-87663000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr4:87659000-87663400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr4:87659000-87676400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr4:87659200-87662000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
33 chr4:87659200-87663000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr4:87659200-87664200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr4:87659400-87661600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
36 chr4:87659400-87662800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
37 chr4:87659400-87663000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
38 chr4:87659600-87664400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
39 chr4:87659800-87661800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr4:87659800-87661800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
41 chr4:87659800-87661800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
42 chr4:87659800-87663000 Strong transcription Ovary ovary
43 chr4:87660000-87661600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
44 chr4:87660000-87662000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr4:87660200-87661600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr4:87660200-87661600 ZNF genes & repeats NHEK skin
47 chr4:87660200-87661800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
48 chr4:87660200-87662600 ZNF genes & repeats H1 Cell Line embryonic stem cell
49 chr4:87660400-87661200 Weak transcription HMEC breast
50 chr4:87660400-87661800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood

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