Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1035804	0.85[ASN][1000 genomes]
rs11133039	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11133041	0.80[AMR][1000 genomes]
rs11724251	0.81[AMR][1000 genomes]
rs11725050	0.81[ASN][1000 genomes]
rs12641259	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12642478	0.82[ASN][1000 genomes]
rs12644593	0.82[ASN][1000 genomes]
rs1365611	0.82[ASN][1000 genomes]
rs1365612	0.82[ASN][1000 genomes]
rs1426947	0.81[AMR][1000 genomes]
rs17293172	0.82[ASN][1000 genomes]
rs17293403	0.82[ASN][1000 genomes]
rs1820520	0.82[ASN][1000 genomes]
rs2244093	0.85[ASN][1000 genomes]
rs2244289	0.84[ASN][1000 genomes]
rs2332897	0.82[ASN][1000 genomes]
rs2555622	0.85[ASN][1000 genomes]
rs2555623	0.85[ASN][1000 genomes]
rs2612662	0.84[ASN][1000 genomes]
rs2612663	0.85[ASN][1000 genomes]
rs2612679	0.85[ASN][1000 genomes]
rs56808147	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6553794	0.84[ASN][1000 genomes]
rs6553795	0.82[ASN][1000 genomes]
rs6553796	0.84[ASN][1000 genomes]
rs6813684	0.82[ASN][1000 genomes]
rs6814296	0.84[ASN][1000 genomes]
rs7673142	0.82[ASN][1000 genomes]
rs930025	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869116	chr4:175231090-175801761	Flanking Active TSS Enhancers Genic enhancers Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:175396000-175442800	Weak transcription	Esophagus	oesophagus

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