The 2.0 version of rSNPBase

Variant report

Variant rs11935221
Chromosome Location chr4:79587818-79587819
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79564400-79589600 Weak transcription Lung lung
2 chr4:79579400-79588000 Weak transcription Spleen Spleen
3 chr4:79580000-79588000 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr4:79580000-79588000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr4:79582000-79588400 Enhancers Fetal Intestine Large intestine
6 chr4:79582000-79588600 Enhancers Fetal Intestine Small intestine
7 chr4:79583600-79588200 Weak transcription Fetal Lung lung
8 chr4:79583800-79588200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr4:79583800-79588200 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr4:79583800-79588200 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr4:79583800-79588600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr4:79583800-79589000 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr4:79583800-79593000 Weak transcription Duodenum Mucosa Duodenum
14 chr4:79584000-79588000 Weak transcription Primary T cells from cord blood blood
15 chr4:79584200-79589000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr4:79584200-79589200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr4:79584400-79588000 Weak transcription Adipose Nuclei Adipose
18 chr4:79584400-79589000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr4:79584400-79589200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr4:79584400-79589200 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr4:79584400-79589200 Weak transcription NHDF-Ad bronchial
22 chr4:79585200-79588000 Weak transcription Brain Hippocampus Middle brain
23 chr4:79585400-79588000 Weak transcription Placenta Placenta
24 chr4:79585800-79590400 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr4:79586000-79590000 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr4:79586000-79590400 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr4:79586000-79590400 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr4:79586000-79590400 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr4:79586800-79590800 Enhancers Primary monocytes fromperipheralblood blood
30 chr4:79586800-79595400 Enhancers Primary B cells from peripheral blood blood
31 chr4:79587000-79588000 Weak transcription K562 blood
32 chr4:79587200-79588400 Enhancers Primary B cells from cord blood blood
33 chr4:79587200-79590800 Enhancers Primary neutrophils fromperipheralblood blood
34 chr4:79587400-79589800 Enhancers HUVEC blood vessel
35 chr4:79587600-79590000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
36 chr4:79587800-79588600 Enhancers GM12878-XiMat blood
37 chr4:79587800-79589600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr4:79587800-79589800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr4:79587800-79590000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr4:79587800-79590200 Enhancers Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015