Variant report

Variant rs11957512
Chromosome Location chr5:59817862-59817863
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:59812800-59822400 Weak transcription Brain Angular Gyrus brain
2 chr5:59814000-59819600 Enhancers Colon Smooth Muscle Colon
3 chr5:59814800-59818800 Enhancers Adipose Nuclei Adipose
4 chr5:59815200-59818600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr5:59815800-59818400 Enhancers Brain Hippocampus Middle brain
6 chr5:59815800-59820600 Enhancers Placenta Amnion Placenta Amnion
7 chr5:59816000-59818000 Enhancers Primary monocytes fromperipheralblood blood
8 chr5:59816000-59818400 Enhancers HepG2 liver
9 chr5:59816000-59818800 Flanking Active TSS Primary B cells from cord blood blood
10 chr5:59816400-59818200 Weak transcription Fetal Stomach stomach
11 chr5:59816600-59818400 Flanking Active TSS Primary B cells from peripheral blood blood
12 chr5:59816600-59818600 Weak transcription Placenta Placenta
13 chr5:59816600-59819600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr5:59816800-59818800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
15 chr5:59817000-59818000 Weak transcription Left Ventricle heart
16 chr5:59817000-59818200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr5:59817000-59818600 Enhancers Primary T cells from cord blood blood
18 chr5:59817000-59822000 Weak transcription Fetal Thymus thymus
19 chr5:59817200-59818000 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr5:59817200-59818000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr5:59817200-59818000 Enhancers iPS-20b Cell Line embryonic stem cell
22 chr5:59817200-59818000 Enhancers Dnd41 blood
23 chr5:59817200-59818400 Active TSS Rectal Mucosa Donor 29 rectum
24 chr5:59817200-59818600 Active TSS GM12878-XiMat blood
25 chr5:59817400-59818000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr5:59817400-59818200 Enhancers Fetal Adrenal Gland Adrenal Gland
27 chr5:59817400-59818800 Enhancers Muscle Satellite Cultured Cells --
28 chr5:59817400-59819000 Enhancers Osteobl bone
29 chr5:59817400-59822000 Weak transcription Brain Substantia Nigra brain
30 chr5:59817600-59818200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
31 chr5:59817600-59818200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr5:59817600-59818400 Flanking Active TSS Primary hematopoietic stem cells blood
33 chr5:59817600-59818800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr5:59817600-59818800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr5:59817600-59819200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
36 chr5:59817800-59818000 Flanking Active TSS Duodenum Mucosa Duodenum
37 chr5:59817800-59818000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
38 chr5:59817800-59818200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr5:59817800-59818200 Enhancers Right Atrium heart
40 chr5:59817800-59819400 Enhancers NH-A brain
41 chr5:59817800-59819600 Enhancers Stomach Smooth Muscle stomach
42 chr5:59817800-59820000 Enhancers Rectal Smooth Muscle rectum
43 chr5:59817800-59829000 Weak transcription Aorta Aorta

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