Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:104186846..104189235-chr7:104190129..104192831,2	MCF-7	breast:
2	chr7:104189213..104191693-chr7:104438258..104440897,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10254402	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10266072	0.86[JPT][hapmap]
rs10480656	0.90[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs11761864	0.86[JPT][hapmap]
rs12705232	0.86[JPT][hapmap]
rs13224644	1.00[CEU][hapmap]
rs13227694	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs13232800	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs13235175	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs13237905	1.00[CHB][hapmap];0.86[JPT][hapmap];0.89[ASN][1000 genomes]
rs2193211	1.00[CEU][hapmap]
rs34244898	0.94[ASN][1000 genomes]
rs34250422	0.97[ASN][1000 genomes]
rs34560470	0.91[ASN][1000 genomes]
rs35068515	0.97[ASN][1000 genomes]
rs35881518	0.92[ASN][1000 genomes]
rs4140743	1.00[CHB][hapmap];0.86[JPT][hapmap];0.94[ASN][1000 genomes]
rs4335061	0.91[CHB][hapmap];0.86[JPT][hapmap]
rs4354244	0.90[CHB][hapmap];0.85[JPT][hapmap]
rs4400323	0.90[CHB][hapmap];0.86[JPT][hapmap]
rs4406342	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs62485146	0.95[ASN][1000 genomes]
rs6969323	0.82[CHB][hapmap];0.86[JPT][hapmap]
rs7780878	0.86[JPT][hapmap]
rs7781577	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:104189200-104191000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

Quick Search: