Variant report

No data

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:49958445..49960562-chr8:49978608..49980368,2	K562	blood:
2	chr8:49955516..49959345-chr8:49967725..49970729,4	K562	blood:
3	chr8:49948031..49950332-chr8:49957405..49959978,2	K562	blood:
4	chr8:49955334..49957010-chr8:49957761..49960286,2	K562	blood:
5	chr8:49954242..49956834-chr8:49957466..49960286,2	K562	blood:
6	chr8:49957600..49959264-chr8:49982765..49984900,3	K562	blood:
7	chr8:49957733..49959287-chr8:50036754..50039574,2	K562	blood:
8	chr8:49892142..49894489-chr8:49957987..49960714,3	K562	blood:
9	chr8:49957324..49959280-chr8:49961057..49962998,2	K562	blood:
10	chr8:49936864..49938883-chr8:49957396..49960240,2	K562	blood:
11	chr8:49957437..49960901-chr8:49963560..49965969,3	K562	blood:

No data

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11987053	1.00[AMR][1000 genomes]
rs11988057	1.00[AMR][1000 genomes]
rs11989446	1.00[AMR][1000 genomes]
rs11989489	1.00[AMR][1000 genomes]
rs11990660	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11992534	1.00[AMR][1000 genomes]
rs11996810	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16939327	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16939335	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16939391	1.00[AMR][1000 genomes]
rs16939404	1.00[AMR][1000 genomes]
rs16939407	1.00[AMR][1000 genomes]
rs16939409	1.00[AMR][1000 genomes]
rs16939472	1.00[AMR][1000 genomes]
rs6980664	1.00[AMR][1000 genomes]
rs6986206	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs6989872	0.85[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6991176	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6997593	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7005086	1.00[AMR][1000 genomes]
rs7017854	1.00[AMR][1000 genomes]
rs7842971	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025068	chr8:49953397-50370208	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49955400-49958600	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr8:49958400-49959000	Enhancers	K562	blood

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