Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49758119..49760348-chr8:49762512..49764848,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11986908	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs11987053	1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11988057	1.00[AMR][1000 genomes]
rs11989446	1.00[AMR][1000 genomes]
rs11989489	1.00[AMR][1000 genomes]
rs11990190	1.00[AMR][1000 genomes]
rs11990660	1.00[AMR][1000 genomes]
rs11991072	1.00[AMR][1000 genomes]
rs11994806	1.00[AMR][1000 genomes]
rs11996439	1.00[AMR][1000 genomes]
rs11996810	1.00[AMR][1000 genomes]
rs11998047	1.00[AMR][1000 genomes]
rs16939327	1.00[AMR][1000 genomes]
rs16939335	1.00[AMR][1000 genomes]
rs6986206	1.00[AMR][1000 genomes]
rs6989872	1.00[AMR][1000 genomes]
rs6991176	1.00[AMR][1000 genomes]
rs6993027	1.00[AMR][1000 genomes]
rs6997593	1.00[AMR][1000 genomes]
rs7005086	1.00[AMR][1000 genomes]
rs7822994	1.00[AMR][1000 genomes]
rs7842971	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890854	chr8:49738821-49838908	Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49758600-49766000	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr8:49758800-49764600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:49758800-49765200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr8:49761200-49764200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr8:49761200-49764400	Enhancers	NHEK	skin
6	chr8:49761600-49763800	Weak transcription	Fetal Lung	lung
7	chr8:49761600-49764000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr8:49761800-49764000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr8:49762000-49763000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr8:49762400-49763000	Flanking Active TSS	HMEC	breast
11	chr8:49762400-49764000	Weak transcription	Fetal Kidney	kidney
12	chr8:49762800-49765600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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