Variant report

Variant rs12000135
Chromosome Location chr9:592526-592527
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:549800-593800 Weak transcription Lung lung
2 chr9:583000-594400 Weak transcription Fetal Kidney kidney
3 chr9:589200-592600 Enhancers Brain Anterior Caudate brain
4 chr9:589400-592800 Enhancers HMEC breast
5 chr9:589400-593400 Enhancers A549 lung
6 chr9:589800-593000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr9:590000-625000 Weak transcription Aorta Aorta
8 chr9:590200-593000 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr9:590200-600200 Weak transcription Placenta Placenta
10 chr9:590200-621600 Weak transcription Psoas Muscle Psoas
11 chr9:590400-592600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr9:590400-593000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr9:591400-592600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr9:591400-592600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr9:591400-592600 Enhancers HUES6 Cell Line embryonic stem cell
16 chr9:591400-592600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
17 chr9:591400-592600 Enhancers Brain Inferior Temporal Lobe brain
18 chr9:591400-592600 Enhancers Brain Substantia Nigra brain
19 chr9:591400-592600 Enhancers Fetal Intestine Large intestine
20 chr9:591400-592600 Enhancers Left Ventricle heart
21 chr9:591400-592600 Enhancers Pancreas Pancrea
22 chr9:591400-593000 Enhancers Brain Hippocampus Middle brain
23 chr9:591400-593000 Enhancers Right Atrium heart
24 chr9:591400-593000 Enhancers Stomach Mucosa stomach
25 chr9:591400-594200 Enhancers iPS-18 Cell Line embryonic stem cell
26 chr9:591400-601600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr9:591600-592800 Enhancers HepG2 liver
28 chr9:591600-596400 Weak transcription Brain Cingulate Gyrus brain
29 chr9:591800-592800 Enhancers NHEK skin
30 chr9:591800-596200 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr9:592000-592600 Enhancers ES-WA7 Cell Line embryonic stem cell
32 chr9:592000-592600 Enhancers H1 Cell Line embryonic stem cell
33 chr9:592000-592600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr9:592000-592600 Enhancers HUES48 Cell Line embryonic stem cell
35 chr9:592000-592600 Enhancers HUES64 Cell Line embryonic stem cell
36 chr9:592000-592800 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr9:592200-592600 Enhancers Duodenum Mucosa Duodenum
38 chr9:592200-592600 ZNF genes & repeats Fetal Intestine Small intestine
39 chr9:592200-592600 Weak transcription Right Ventricle heart
40 chr9:592200-594600 Enhancers Fetal Heart heart
41 chr9:592400-592800 Weak transcription Esophagus oesophagus
42 chr9:592400-594600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr9:592400-596000 Weak transcription Brain Angular Gyrus brain

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