Variant report

Variant	rs12022736
Chromosome Location	chr1:220605378-220605379
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12025515	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12032166	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12042911	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12042936	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12405059	0.83[CHB][hapmap];0.83[JPT][hapmap]
rs12408337	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12568419	0.88[CHB][hapmap];0.83[JPT][hapmap]
rs12726257	0.89[CHB][hapmap];0.94[JPT][hapmap]
rs4262550	0.82[AMR][1000 genomes]
rs55646165	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs58749670	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs59321953	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220603000-220606000	Enhancers	Hela-S3	cervix
2	chr1:220603200-220606000	Enhancers	Placenta	Placenta
3	chr1:220603800-220605600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr1:220604800-220605600	Enhancers	Adipose Nuclei	Adipose
5	chr1:220605000-220605400	Enhancers	Fetal Heart	heart
6	chr1:220605000-220606000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr1:220605000-220606800	Enhancers	Fetal Muscle Leg	muscle
8	chr1:220605200-220606600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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