The 2.0 version of rSNPBase

Variant report

Variant rs12025176
Chromosome Location chr1:172869674-172869675
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172864800-172870000 Enhancers HUVEC blood vessel
2 chr1:172865000-172871200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:172865200-172870400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr1:172865200-172870400 Weak transcription HSMMtube muscle
5 chr1:172865200-172871400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr1:172865200-172872200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:172865200-172872200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:172865200-172875200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:172865600-172874600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr1:172865800-172875200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:172865800-172878400 Weak transcription Placenta Amnion Placenta Amnion
12 chr1:172867200-172871600 Weak transcription NHEK skin
13 chr1:172867200-172872200 Weak transcription HMEC breast
14 chr1:172867400-172871400 Weak transcription Hela-S3 cervix
15 chr1:172867800-172871400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr1:172868000-172870400 Enhancers Primary T cells from cord blood blood
17 chr1:172868200-172870400 Enhancers Primary T helper cells PMA-I stimulated --
18 chr1:172868400-172870800 Enhancers Primary hematopoietic stem cells blood
19 chr1:172868400-172871000 Weak transcription HSMM muscle
20 chr1:172868400-172871200 Weak transcription NHDF-Ad bronchial
21 chr1:172868600-172870800 Enhancers Primary B cells from peripheral blood blood
22 chr1:172868600-172871400 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:172868600-172872000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:172868600-172872200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:172868600-172872600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:172868800-172871400 Weak transcription NH-A brain
27 chr1:172868800-172871400 Weak transcription Osteobl bone
28 chr1:172868800-172872400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:172869400-172870000 Enhancers Primary T helper cells fromperipheralblood blood
30 chr1:172869400-172870600 Enhancers Primary monocytes fromperipheralblood blood
31 chr1:172869600-172870000 Flanking Active TSS Primary B cells from cord blood blood
32 chr1:172869600-172870000 Active TSS Primary hematopoietic stem cells short term culture blood
33 chr1:172869600-172870000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr1:172869600-172870000 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr1:172869600-172870000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:172869600-172870000 Enhancers Dnd41 blood
37 chr1:172869600-172870200 Enhancers Primary neutrophils fromperipheralblood blood
38 chr1:172869600-172870200 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr1:172869600-172870200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
40 chr1:172869600-172870400 Enhancers Primary T helper naive cells fromperipheralblood blood
41 chr1:172869600-172870400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:172869600-172876800 Enhancers NHLF lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015