The 2.0 version of rSNPBase

Variant report

Variant rs12027295
Chromosome Location chr1:172012633-172012634
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171994000-172020400 Weak transcription Left Ventricle heart
2 chr1:172000000-172012800 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr1:172000600-172013600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr1:172000800-172013800 Weak transcription Fetal Brain Female brain
5 chr1:172001400-172019000 Weak transcription Fetal Brain Male brain
6 chr1:172002800-172013200 Weak transcription Primary T cells from cord blood blood
7 chr1:172004000-172014000 Weak transcription Lung lung
8 chr1:172005600-172015200 Weak transcription HSMMtube muscle
9 chr1:172006000-172013800 Weak transcription Brain Germinal Matrix brain
10 chr1:172006400-172025600 Weak transcription Adipose Nuclei Adipose
11 chr1:172007600-172014000 Weak transcription Brain Substantia Nigra brain
12 chr1:172007600-172014800 Weak transcription Thymus Thymus
13 chr1:172008400-172013200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr1:172009000-172013800 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:172009200-172022800 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:172010000-172022200 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr1:172010400-172013800 Weak transcription Brain Hippocampus Middle brain
18 chr1:172010400-172014000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr1:172010400-172022000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:172010600-172012800 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:172010600-172014800 Weak transcription Aorta Aorta
22 chr1:172010600-172022400 Weak transcription HMEC breast
23 chr1:172010600-172051400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:172010800-172013800 Weak transcription Brain Angular Gyrus brain
25 chr1:172010800-172019800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:172010800-172022400 Weak transcription NHEK skin
27 chr1:172010800-172037600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr1:172011000-172019600 Weak transcription Stomach Smooth Muscle stomach
29 chr1:172011400-172037800 Weak transcription Ovary ovary
30 chr1:172012000-172014000 Weak transcription Fetal Kidney kidney
31 chr1:172012400-172013400 Genic enhancers Brain Anterior Caudate brain
32 chr1:172012400-172015000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:172012600-172013400 Genic enhancers Brain Cingulate Gyrus brain
34 chr1:172012600-172013800 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:172012600-172022600 Weak transcription Fetal Lung lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015