The 2.0 version of rSNPBase

Variant report

Variant rs12031859
Chromosome Location chr1:224004520-224004521
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223956600-224004600 Strong transcription Primary monocytes fromperipheralblood blood
2 chr1:223956600-224004600 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr1:223960200-224025400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:223964400-224008000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:223988200-224012000 Weak transcription Colon Smooth Muscle Colon
6 chr1:223990600-224007000 Weak transcription Fetal Brain Male brain
7 chr1:223991200-224007400 Weak transcription Brain Inferior Temporal Lobe brain
8 chr1:223991200-224007400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:223991200-224010800 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:223991400-224007600 Weak transcription Brain Cingulate Gyrus brain
11 chr1:223993400-224008400 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr1:223994600-224007000 Weak transcription Colonic Mucosa Colon
13 chr1:223994600-224008200 Weak transcription Psoas Muscle Psoas
14 chr1:223995800-224009400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:223996000-224007600 Weak transcription Hela-S3 cervix
16 chr1:223997200-224004600 Strong transcription Primary neutrophils fromperipheralblood blood
17 chr1:223999600-224007800 Weak transcription Brain Angular Gyrus brain
18 chr1:223999800-224004800 Strong transcription Fetal Intestine Large intestine
19 chr1:223999800-224010800 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr1:224000200-224007400 Weak transcription Brain Hippocampus Middle brain
21 chr1:224001000-224010000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:224001400-224007600 Weak transcription Brain Germinal Matrix brain
23 chr1:224001400-224008400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:224001600-224006800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:224001800-224010600 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr1:224001800-224010800 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:224002000-224005600 Weak transcription Fetal Muscle Trunk muscle
28 chr1:224002000-224005800 Weak transcription Fetal Stomach stomach
29 chr1:224002000-224006800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr1:224002000-224006800 Weak transcription Adipose Nuclei Adipose
31 chr1:224002000-224006800 Weak transcription Stomach Smooth Muscle stomach
32 chr1:224002000-224007600 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:224002000-224007600 Weak transcription Fetal Kidney kidney
34 chr1:224002000-224007600 Weak transcription Lung lung
35 chr1:224002000-224007600 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:224002000-224008200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr1:224002000-224008200 Weak transcription Spleen Spleen
38 chr1:224002000-224008400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:224002000-224015000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:224002000-224023800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr1:224002200-224005400 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr1:224002200-224005600 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr1:224002200-224005600 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr1:224002200-224005600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr1:224002200-224006800 Weak transcription Primary T cells fromperipheralblood blood
46 chr1:224002200-224007000 Weak transcription H1 Cell Line embryonic stem cell
47 chr1:224002200-224007000 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr1:224002200-224007000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr1:224002200-224007200 Weak transcription Fetal Brain Female brain
50 chr1:224002200-224007600 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015