Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10443262	0.85[CHB][hapmap];0.82[CHD][hapmap];0.90[JPT][hapmap]
rs1108801	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11209697	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12022025	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12039590	0.82[CHD][hapmap]
rs12046339	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12729410	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1327451	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1327453	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1327460	0.92[CHB][hapmap];0.95[JPT][hapmap]
rs1343786	0.83[ASN][1000 genomes]
rs1409985	0.92[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs1889599	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2225025	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs2257598	0.83[EUR][1000 genomes]
rs2421783	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2421790	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs34289107	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34384777	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4650085	1.00[ASN][1000 genomes]
rs7530345	0.92[CHB][hapmap];0.92[CHD][hapmap];0.95[JPT][hapmap]
rs7533733	0.92[CHB][hapmap];0.94[JPT][hapmap];0.81[ASN][1000 genomes]
rs871577	1.00[ASN][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs12033260	PTGER3	cis	parietal	SCAN
rs12033260	LRRC40	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71218800-71221800	Enhancers	K562	blood

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