The 2.0 version of rSNPBase

Variant report

Variant rs12034120
Chromosome Location chr1:224026692-224026693
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224017600-224026800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:224019400-224027000 Enhancers Primary T helper cells fromperipheralblood blood
3 chr1:224019600-224027400 Enhancers Fetal Heart heart
4 chr1:224020600-224032400 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:224020800-224028600 Weak transcription Placenta Placenta
6 chr1:224020800-224031600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr1:224021200-224027000 Enhancers Brain Substantia Nigra brain
8 chr1:224021400-224027000 Enhancers Fetal Lung lung
9 chr1:224022800-224026800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:224023000-224026800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:224023000-224027000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr1:224023000-224029000 Enhancers Cortex derived primary cultured neurospheres brain
13 chr1:224023000-224030600 Weak transcription Fetal Kidney kidney
14 chr1:224023200-224031600 Weak transcription Hela-S3 cervix
15 chr1:224023400-224027000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:224023400-224027400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr1:224023600-224027000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr1:224023800-224027000 Enhancers HUES48 Cell Line embryonic stem cell
19 chr1:224023800-224028000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:224024000-224027800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:224024000-224028000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:224024000-224031800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr1:224024000-224031800 Weak transcription Thymus Thymus
24 chr1:224024200-224027000 Enhancers Primary T killer memory cells from peripheral blood blood
25 chr1:224024200-224027200 Enhancers HUES64 Cell Line embryonic stem cell
26 chr1:224024200-224028000 Weak transcription NHDF-Ad bronchial
27 chr1:224024200-224031600 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr1:224024200-224031600 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr1:224024200-224031600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr1:224024200-224031800 Weak transcription Adipose Nuclei Adipose
31 chr1:224024400-224026800 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr1:224024400-224031800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr1:224024600-224028800 Weak transcription Psoas Muscle Psoas
34 chr1:224024600-224029600 Weak transcription Pancreas Pancrea
35 chr1:224024600-224030800 Weak transcription Primary B cells from cord blood blood
36 chr1:224024600-224031600 Weak transcription Primary B cells from peripheral blood blood
37 chr1:224024600-224031800 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr1:224024600-224031800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:224024600-224031800 Weak transcription Brain Cingulate Gyrus brain
40 chr1:224024600-224031800 Weak transcription Esophagus oesophagus
41 chr1:224024800-224028200 Enhancers K562 blood
42 chr1:224025000-224027000 Enhancers iPS-15b Cell Line embryonic stem cell
43 chr1:224025000-224028200 Weak transcription HSMMtube muscle
44 chr1:224025200-224028000 Weak transcription NH-A brain
45 chr1:224025200-224030000 Weak transcription H9 Cell Line embryonic stem cell
46 chr1:224025200-224030600 Weak transcription NHEK skin
47 chr1:224025200-224031800 Weak transcription Rectal Smooth Muscle rectum
48 chr1:224025400-224027200 Enhancers Aorta Aorta
49 chr1:224025400-224028000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr1:224025400-224028000 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015