The 2.0 version of rSNPBase

Variant report

Variant rs12037853
Chromosome Location chr1:172852403-172852404
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172840600-172855200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:172850600-172856800 Enhancers HUVEC blood vessel
3 chr1:172851600-172852600 Enhancers Osteobl bone
4 chr1:172851600-172853000 Enhancers Psoas Muscle Psoas
5 chr1:172851800-172853600 Enhancers Primary T helper 17 cells PMA-I stimulated --
6 chr1:172852000-172852600 Bivalent Enhancer GM12878-XiMat blood
7 chr1:172852000-172853200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:172852000-172853200 Enhancers NHDF-Ad bronchial
9 chr1:172852000-172853400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr1:172852000-172853600 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr1:172852000-172855600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:172852000-172855600 Enhancers HSMM muscle
13 chr1:172852200-172852800 Enhancers Right Atrium heart
14 chr1:172852200-172853200 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr1:172852200-172853200 Enhancers Fetal Thymus thymus
16 chr1:172852200-172853400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr1:172852200-172853400 Enhancers NH-A brain
18 chr1:172852200-172853600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:172852200-172853600 Enhancers Primary T cells fromperipheralblood blood
20 chr1:172852200-172853800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:172852200-172854000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:172852200-172854000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:172852200-172854800 Enhancers Skeletal Muscle Female skeletal muscle
24 chr1:172852200-172855200 Enhancers HSMMtube muscle
25 chr1:172852200-172855400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:172852200-172855400 Enhancers Muscle Satellite Cultured Cells --
27 chr1:172852200-172855600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:172852400-172852600 Enhancers Pancreas Pancrea
29 chr1:172852400-172853000 Enhancers Primary T cells from cord blood blood
30 chr1:172852400-172853000 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr1:172852400-172853200 Enhancers Fetal Muscle Leg muscle
32 chr1:172852400-172853200 Flanking Active TSS Dnd41 blood
33 chr1:172852400-172853600 Enhancers Primary B cells from peripheral blood blood
34 chr1:172852400-172853600 Enhancers Primary T helper cells fromperipheralblood blood
35 chr1:172852400-172854000 Enhancers Primary hematopoietic stem cells blood
36 chr1:172852400-172854200 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr1:172852400-172855800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015