The 2.0 version of rSNPBase

Variant report

Variant rs12044432
Chromosome Location chr1:220798110-220798111
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220749800-220799000 Weak transcription Aorta Aorta
2 chr1:220751800-220799000 Weak transcription Fetal Stomach stomach
3 chr1:220752600-220808600 Weak transcription Left Ventricle heart
4 chr1:220761200-220799200 Weak transcription H1 Cell Line embryonic stem cell
5 chr1:220767400-220798600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:220767600-220799000 Weak transcription Fetal Muscle Trunk muscle
7 chr1:220767800-220826400 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:220768000-220804600 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr1:220768000-220813800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:220768400-220799000 Weak transcription Adipose Nuclei Adipose
11 chr1:220776000-220798800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:220778800-220837200 Weak transcription NHEK skin
13 chr1:220782800-220825800 Weak transcription Fetal Brain Male brain
14 chr1:220783200-220815000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:220784200-220836600 Weak transcription Fetal Lung lung
16 chr1:220784800-220799200 Weak transcription Fetal Muscle Leg muscle
17 chr1:220784800-220815000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:220785000-220799200 Weak transcription Fetal Brain Female brain
19 chr1:220785000-220815400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr1:220785800-220808600 Weak transcription Brain Anterior Caudate brain
21 chr1:220786800-220799800 Weak transcription Fetal Heart heart
22 chr1:220788800-220799000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:220791000-220804200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:220791200-220828600 Weak transcription Right Ventricle heart
25 chr1:220791200-220841200 Weak transcription HMEC breast
26 chr1:220791400-220801600 Weak transcription H9 Cell Line embryonic stem cell
27 chr1:220792000-220834200 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr1:220792200-220798200 Weak transcription Brain Germinal Matrix brain
29 chr1:220792400-220799000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:220792600-220798600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:220792600-220798800 Weak transcription Stomach Smooth Muscle stomach
32 chr1:220792800-220803600 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr1:220794000-220799200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:220794000-220799200 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:220794600-220799000 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr1:220795000-220798800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:220795200-220799200 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr1:220795600-220801000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:220795800-220802000 Strong transcription Cortex derived primary cultured neurospheres brain
40 chr1:220796200-220798600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr1:220796200-220827800 Weak transcription Gastric stomach
42 chr1:220796600-220799200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:220796800-220799600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:220797200-220801400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr1:220798000-220836400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015