The 2.0 version of rSNPBase

Variant report

Variant rs12046021
Chromosome Location chr1:160831866-160831867
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160826600-160832200 Weak transcription Primary T helper cells PMA-I stimulated --
2 chr1:160828600-160832200 Weak transcription Right Atrium heart
3 chr1:160828600-160835000 Weak transcription Fetal Intestine Large intestine
4 chr1:160828800-160832000 Enhancers Primary neutrophils fromperipheralblood blood
5 chr1:160829200-160832400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:160830000-160833000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
7 chr1:160830000-160833200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr1:160830000-160833800 Enhancers Primary B cells from cord blood blood
9 chr1:160830200-160834200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
10 chr1:160830600-160832600 Flanking Active TSS Primary hematopoietic stem cells blood
11 chr1:160830600-160833000 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
12 chr1:160830600-160833000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:160830600-160833600 Flanking Active TSS Primary monocytes fromperipheralblood blood
14 chr1:160830800-160832000 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr1:160830800-160832600 Active TSS Primary T killer memory cells from peripheral blood blood
16 chr1:160830800-160832600 Enhancers Spleen Spleen
17 chr1:160830800-160832800 Active TSS Rectal Mucosa Donor 29 rectum
18 chr1:160831200-160832000 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr1:160831200-160832800 Weak transcription Ovary ovary
20 chr1:160831200-160833600 Enhancers Primary B cells from peripheral blood blood
21 chr1:160831400-160832200 Weak transcription Colonic Mucosa Colon
22 chr1:160831600-160832200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:160831600-160832200 Enhancers Fetal Thymus thymus
24 chr1:160831600-160832800 Flanking Active TSS Primary T cells fromperipheralblood blood
25 chr1:160831800-160832000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:160831800-160832000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
27 chr1:160831800-160832000 Active TSS Liver Liver
28 chr1:160831800-160832000 Flanking Active TSS Duodenum Mucosa Duodenum
29 chr1:160831800-160832200 Enhancers Primary T helper cells fromperipheralblood blood
30 chr1:160831800-160832400 Active TSS Fetal Intestine Small intestine
31 chr1:160831800-160832400 Bivalent Enhancer Fetal Muscle Trunk muscle
32 chr1:160831800-160832400 Active TSS Skeletal Muscle Female skeletal muscle
33 chr1:160831800-160832800 Enhancers Placenta Placenta
34 chr1:160831800-160833000 Enhancers Primary T cells from cord blood blood
35 chr1:160831800-160833000 Enhancers Fetal Heart heart
36 chr1:160831800-160834400 Enhancers GM12878-XiMat blood

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Last update: Aug 31, 2015