Variant report

Variant	rs12046391
Chromosome Location	chr1:211158768-211158769
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 63 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:63)

rs_ID	r²[population]
rs10863872	0.81[ASN][1000 genomes]
rs11119654	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11119668	0.84[ASN][1000 genomes]
rs11806852	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12021704	0.82[ASN][1000 genomes]
rs12022715	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12022739	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12025525	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12026311	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12026374	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12027535	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12028941	0.82[ASN][1000 genomes]
rs12030715	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12030905	0.82[ASN][1000 genomes]
rs12036999	0.91[ASN][1000 genomes]
rs12039302	0.96[ASN][1000 genomes]
rs12043937	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12043952	0.96[ASN][1000 genomes]
rs12070402	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12406562	0.96[ASN][1000 genomes]
rs12407609	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1501544	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs1501545	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs1501548	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1501549	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1501550	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1532682	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2358210	0.88[ASN][1000 genomes]
rs4570464	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4575146	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs56999636	0.98[ASN][1000 genomes]
rs57179129	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57655345	0.91[ASN][1000 genomes]
rs58255417	0.85[ASN][1000 genomes]
rs61848562	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61848568	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs61848992	0.88[ASN][1000 genomes]
rs61849000	0.93[ASN][1000 genomes]
rs61849015	0.96[ASN][1000 genomes]
rs61849024	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs61850228	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6540636	0.93[ASN][1000 genomes]
rs6540638	0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6540648	0.85[ASN][1000 genomes]
rs6659020	0.87[ASN][1000 genomes]
rs6659135	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6663672	0.87[ASN][1000 genomes]
rs6666287	0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6666342	0.85[ASN][1000 genomes]
rs6675213	0.81[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs6678568	0.90[ASN][1000 genomes]
rs6680997	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6687069	0.83[ASN][1000 genomes]
rs6688920	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6689715	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7514606	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7515316	0.93[ASN][1000 genomes]
rs7518841	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7523929	0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7537597	0.89[ASN][1000 genomes]
rs7551412	0.95[ASN][1000 genomes]
rs7553997	0.97[ASN][1000 genomes]
rs7554723	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211152600-211169400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211152800-211183400	Weak transcription	HSMMtube	muscle
3	chr1:211154200-211161800	Weak transcription	HSMM	muscle
4	chr1:211155400-211161200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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