The 2.0 version of rSNPBase

Variant report

Variant rs12048740
Chromosome Location chr1:220946758-220946759
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220922800-220959600 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:220922800-220959600 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:220923200-220948000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:220925000-220959400 Weak transcription Brain Angular Gyrus brain
5 chr1:220925400-220950200 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr1:220930000-220950000 Weak transcription Fetal Brain Male brain
7 chr1:220930000-220950200 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr1:220930000-220950400 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:220930000-220959600 Weak transcription Psoas Muscle Psoas
10 chr1:220930200-220950000 Weak transcription Brain Anterior Caudate brain
11 chr1:220930400-220950000 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr1:220930400-220959600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:220930600-220950000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:220931200-220959000 Weak transcription Brain Substantia Nigra brain
15 chr1:220936200-220959600 Weak transcription A549 lung
16 chr1:220936600-220958200 Weak transcription Esophagus oesophagus
17 chr1:220939000-220960400 Weak transcription Small Intestine intestine
18 chr1:220941200-220949800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:220941400-220948400 Strong transcription Fetal Muscle Leg muscle
20 chr1:220942200-220946800 Strong transcription Sigmoid Colon Sigmoid Colon
21 chr1:220942200-220948200 Strong transcription Fetal Stomach stomach
22 chr1:220942400-220950200 Weak transcription Right Atrium heart
23 chr1:220942400-220950200 Weak transcription Stomach Mucosa stomach
24 chr1:220942800-220948200 Strong transcription Fetal Intestine Small intestine
25 chr1:220942800-220948800 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr1:220943000-220958400 Weak transcription HepG2 liver
27 chr1:220943000-220959000 Strong transcription Fetal Intestine Large intestine
28 chr1:220944000-220947800 Weak transcription Fetal Heart heart
29 chr1:220944200-220948400 Strong transcription Left Ventricle heart
30 chr1:220944200-220948800 Weak transcription Brain Cingulate Gyrus brain
31 chr1:220944200-220950000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:220944200-220950000 Weak transcription Hela-S3 cervix
33 chr1:220944200-220950200 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:220944200-220956000 Weak transcription Pancreas Pancrea
35 chr1:220944200-220959200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:220944200-220959400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr1:220944200-220959400 Weak transcription Fetal Kidney kidney
38 chr1:220944200-220959600 Weak transcription NHLF lung
39 chr1:220944200-220959800 Weak transcription Gastric stomach
40 chr1:220944400-220947000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:220944400-220947400 Strong transcription Liver Liver
42 chr1:220944400-220947400 Weak transcription Stomach Smooth Muscle stomach
43 chr1:220944400-220950200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:220944400-220954600 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:220944400-220956000 Weak transcription Aorta Aorta
46 chr1:220944400-220956800 Weak transcription Spleen Spleen
47 chr1:220944400-220958800 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr1:220944400-220959000 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr1:220944400-220959200 Weak transcription Rectal Smooth Muscle rectum
50 chr1:220944400-220959400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015