Variant report

Variant	rs12063053
Chromosome Location	chr1:92906411-92906412
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:92774363..92776060-chr1:92906114..92908200,2	MCF-7	breast:

Extended variants
information (count: 91 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:91)

rs_ID	r²[population]
rs10399670	1.00[EUR][1000 genomes]
rs10399724	1.00[EUR][1000 genomes]
rs10399865	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10399960	1.00[EUR][1000 genomes]
rs11164364	1.00[EUR][1000 genomes]
rs11164660	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11164793	1.00[EUR][1000 genomes]
rs11164794	1.00[EUR][1000 genomes]
rs11164795	1.00[EUR][1000 genomes]
rs11164797	1.00[EUR][1000 genomes]
rs11166390	1.00[EUR][1000 genomes]
rs11166543	1.00[EUR][1000 genomes]
rs12057715	1.00[EUR][1000 genomes]
rs12057860	1.00[EUR][1000 genomes]
rs12058147	1.00[EUR][1000 genomes]
rs12059319	1.00[EUR][1000 genomes]
rs12059439	1.00[EUR][1000 genomes]
rs12059473	1.00[EUR][1000 genomes]
rs12059645	1.00[EUR][1000 genomes]
rs12062143	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12064015	1.00[EUR][1000 genomes]
rs12064732	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12065163	1.00[EUR][1000 genomes]
rs12065694	1.00[EUR][1000 genomes]
rs12065702	1.00[EUR][1000 genomes]
rs12066980	1.00[EUR][1000 genomes]
rs12067302	1.00[EUR][1000 genomes]
rs12068883	1.00[EUR][1000 genomes]
rs12069582	1.00[EUR][1000 genomes]
rs12069690	1.00[EUR][1000 genomes]
rs12069984	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12070123	1.00[EUR][1000 genomes]
rs12070249	1.00[EUR][1000 genomes]
rs12071033	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12072804	1.00[EUR][1000 genomes]
rs12075870	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12076399	1.00[EUR][1000 genomes]
rs12076954	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12078738	1.00[EUR][1000 genomes]
rs12080525	1.00[EUR][1000 genomes]
rs12081539	1.00[EUR][1000 genomes]
rs12083424	1.00[EUR][1000 genomes]
rs12084412	1.00[EUR][1000 genomes]
rs12086354	1.00[EUR][1000 genomes]
rs12088142	1.00[EUR][1000 genomes]
rs12088549	1.00[EUR][1000 genomes]
rs12088562	1.00[EUR][1000 genomes]
rs12089666	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12091427	1.00[EUR][1000 genomes]
rs12092747	1.00[EUR][1000 genomes]
rs12093038	1.00[EUR][1000 genomes]
rs12093590	1.00[EUR][1000 genomes]
rs12093905	1.00[EUR][1000 genomes]
rs12094086	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12097184	1.00[EUR][1000 genomes]
rs1487538	1.00[EUR][1000 genomes]
rs17100275	1.00[EUR][1000 genomes]
rs17131606	1.00[EUR][1000 genomes]
rs17131614	1.00[EUR][1000 genomes]
rs17131625	1.00[EUR][1000 genomes]
rs17131626	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17131634	1.00[EUR][1000 genomes]
rs28696358	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28716853	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35166258	1.00[EUR][1000 genomes]
rs58471288	1.00[EUR][1000 genomes]
rs59366523	1.00[EUR][1000 genomes]
rs59385116	1.00[EUR][1000 genomes]
rs59800659	1.00[EUR][1000 genomes]
rs60332284	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6657876	1.00[EUR][1000 genomes]
rs6679077	1.00[EUR][1000 genomes]
rs72958765	1.00[EUR][1000 genomes]
rs72958768	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72958786	1.00[EUR][1000 genomes]
rs72958791	1.00[EUR][1000 genomes]
rs72960809	1.00[EUR][1000 genomes]
rs72960813	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72960817	1.00[EUR][1000 genomes]
rs72960824	1.00[EUR][1000 genomes]
rs72960880	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72960900	1.00[EUR][1000 genomes]
rs72962603	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72962608	1.00[EUR][1000 genomes]
rs72962610	1.00[EUR][1000 genomes]
rs72962621	1.00[EUR][1000 genomes]
rs72962625	1.00[EUR][1000 genomes]
rs72962628	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7512045	1.00[EUR][1000 genomes]
rs7552286	1.00[EUR][1000 genomes]
rs9660398	1.00[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:92902600-92907200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:92906000-92907000	Enhancers	HepG2	liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links