The 2.0 version of rSNPBase

Variant report

Variant rs12070123
Chromosome Location chr1:92991860-92991861
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92968200-93042800 Weak transcription HSMM muscle
2 chr1:92968400-92997600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr1:92969800-92992000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:92969800-92996800 Weak transcription NH-A brain
5 chr1:92970000-92992200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:92971400-92998600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:92972600-93013400 Weak transcription Ovary ovary
8 chr1:92973800-92997600 Weak transcription Duodenum Mucosa Duodenum
9 chr1:92973800-93002200 Weak transcription Fetal Intestine Large intestine
10 chr1:92976400-93042400 Weak transcription Fetal Stomach stomach
11 chr1:92977400-92993200 Weak transcription Brain Hippocampus Middle brain
12 chr1:92977600-92995000 Weak transcription Fetal Muscle Trunk muscle
13 chr1:92977600-92995800 Weak transcription Right Ventricle heart
14 chr1:92977600-93010600 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:92977600-93013200 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:92977800-92995000 Weak transcription Lung lung
17 chr1:92978000-92995600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:92979600-92992600 Weak transcription Left Ventricle heart
19 chr1:92979600-92993000 Weak transcription Placenta Placenta
20 chr1:92979600-93002200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:92981800-93004000 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr1:92981800-93033400 Weak transcription NHEK skin
23 chr1:92982400-92992000 Weak transcription Primary monocytes fromperipheralblood blood
24 chr1:92983400-92998600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:92983600-93066200 Weak transcription Adipose Nuclei Adipose
26 chr1:92984400-92992600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:92985200-92992000 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr1:92986800-93002400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:92990800-93003800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:92991600-92993000 Strong transcription Fetal Intestine Small intestine
31 chr1:92991800-92992200 Strong transcription Brain Angular Gyrus brain
32 chr1:92991800-92994400 Strong transcription Liver Liver

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Last update: Aug 31, 2015