The 2.0 version of rSNPBase

Variant report

Variant rs12073144
Chromosome Location chr1:211498598-211498599
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211461200-211499600 Weak transcription Psoas Muscle Psoas
2 chr1:211461400-211499600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:211461600-211499600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:211478600-211499800 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:211483600-211499600 Weak transcription Fetal Heart heart
6 chr1:211486400-211499400 Weak transcription Stomach Mucosa stomach
7 chr1:211486400-211500200 Weak transcription Small Intestine intestine
8 chr1:211487200-211498800 Weak transcription Thymus Thymus
9 chr1:211487200-211499400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:211487200-211499600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:211487200-211499600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:211487200-211499600 Weak transcription Brain Angular Gyrus brain
13 chr1:211487200-211499600 Weak transcription Brain Cingulate Gyrus brain
14 chr1:211487200-211499600 Weak transcription Fetal Intestine Small intestine
15 chr1:211487200-211499600 Weak transcription Gastric stomach
16 chr1:211487200-211499600 Weak transcription Left Ventricle heart
17 chr1:211487200-211499600 Weak transcription Lung lung
18 chr1:211487200-211499600 Weak transcription Pancreas Pancrea
19 chr1:211487200-211499800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:211487200-211499800 Weak transcription Aorta Aorta
21 chr1:211487200-211499800 Weak transcription Esophagus oesophagus
22 chr1:211487200-211499800 Weak transcription Ovary ovary
23 chr1:211487200-211499800 Weak transcription Right Ventricle heart
24 chr1:211487200-211500200 Weak transcription Spleen Spleen
25 chr1:211487400-211499600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:211487400-211499600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr1:211487400-211499600 Weak transcription Brain Anterior Caudate brain
28 chr1:211487400-211499600 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:211487400-211499600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:211487400-211499800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:211487400-211499800 Weak transcription Placenta Amnion Placenta Amnion
32 chr1:211487400-211499800 Weak transcription HSMMtube muscle
33 chr1:211487600-211499600 Weak transcription Brain Hippocampus Middle brain
34 chr1:211487600-211499600 Weak transcription NHLF lung
35 chr1:211488000-211499600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:211488000-211499600 Weak transcription Brain Substantia Nigra brain
37 chr1:211488200-211499000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:211488200-211499400 Weak transcription Rectal Smooth Muscle rectum
39 chr1:211488200-211499600 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr1:211488400-211499400 Weak transcription Fetal Muscle Trunk muscle
41 chr1:211488600-211499600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:211488600-211499600 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:211488600-211499600 Weak transcription HUVEC blood vessel
44 chr1:211488800-211498600 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr1:211489200-211498800 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr1:211489200-211498800 Weak transcription GM12878-XiMat blood
47 chr1:211489200-211499000 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr1:211489200-211499600 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr1:211489200-211499600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr1:211489400-211498600 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015