The 2.0 version of rSNPBase

Variant report

Variant rs12074608
Chromosome Location chr1:93411781-93411782
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93400400-93416600 Weak transcription Fetal Intestine Small intestine
2 chr1:93400800-93421800 Weak transcription Fetal Lung lung
3 chr1:93405800-93412600 Enhancers Brain Anterior Caudate brain
4 chr1:93406200-93415200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:93406600-93413200 Weak transcription HMEC breast
6 chr1:93407000-93412200 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr1:93407000-93412800 Enhancers Primary B cells from peripheral blood blood
8 chr1:93407200-93412200 Enhancers Brain Inferior Temporal Lobe brain
9 chr1:93407600-93415400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr1:93407800-93412600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr1:93407800-93412600 Enhancers Brain Cingulate Gyrus brain
12 chr1:93408600-93412200 Enhancers Primary T helper cells fromperipheralblood blood
13 chr1:93408800-93411800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
14 chr1:93408800-93412200 Enhancers Brain Angular Gyrus brain
15 chr1:93408800-93412400 Enhancers Primary T cells from cord blood blood
16 chr1:93409000-93413200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:93409000-93415200 Weak transcription A549 lung
18 chr1:93409000-93415400 Weak transcription HSMMtube muscle
19 chr1:93409200-93413200 Weak transcription NHEK skin
20 chr1:93409200-93415200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:93409200-93415200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:93409200-93415200 Weak transcription Duodenum Mucosa Duodenum
23 chr1:93409200-93421200 Weak transcription Fetal Brain Female brain
24 chr1:93409400-93415200 Weak transcription Stomach Mucosa stomach
25 chr1:93409400-93415200 Weak transcription NHDF-Ad bronchial
26 chr1:93409400-93415400 Weak transcription Osteobl bone
27 chr1:93409600-93426000 Weak transcription Lung lung
28 chr1:93410000-93412400 Enhancers Liver Liver
29 chr1:93410200-93412400 Enhancers HepG2 liver
30 chr1:93410600-93414000 Enhancers Brain Hippocampus Middle brain
31 chr1:93410600-93415400 Weak transcription NHLF lung
32 chr1:93410600-93415600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:93410600-93415600 Weak transcription Right Ventricle heart
34 chr1:93410600-93425600 Weak transcription Aorta Aorta
35 chr1:93410600-93425800 Weak transcription Right Atrium heart
36 chr1:93410600-93426000 Weak transcription Left Ventricle heart
37 chr1:93410800-93412200 Weak transcription Primary T cells fromperipheralblood blood
38 chr1:93410800-93412600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
39 chr1:93410800-93413800 Enhancers Brain Substantia Nigra brain
40 chr1:93410800-93415400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:93410800-93415800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:93410800-93416000 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr1:93410800-93416600 Weak transcription Thymus Thymus
44 chr1:93411000-93415200 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr1:93411000-93422000 Weak transcription Stomach Smooth Muscle stomach
46 chr1:93411000-93425800 Weak transcription Primary hematopoietic stem cells blood
47 chr1:93411200-93415400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr1:93411200-93415400 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr1:93411400-93413200 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr1:93411400-93415200 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015