The 2.0 version of rSNPBase

Variant report

Variant rs12075870
Chromosome Location chr1:92980972-92980973
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92952800-92991400 Weak transcription Pancreas Pancrea
2 chr1:92967800-92986000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:92968200-93042800 Weak transcription HSMM muscle
4 chr1:92968400-92997600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr1:92969600-92984200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:92969800-92992000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr1:92969800-92996800 Weak transcription NH-A brain
8 chr1:92970000-92992200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:92970600-92981800 Weak transcription Primary B cells from cord blood blood
10 chr1:92971400-92998600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:92972600-93013400 Weak transcription Ovary ovary
12 chr1:92973000-92983800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:92973400-92987400 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:92973800-92997600 Weak transcription Duodenum Mucosa Duodenum
15 chr1:92973800-93002200 Weak transcription Fetal Intestine Large intestine
16 chr1:92976400-93042400 Weak transcription Fetal Stomach stomach
17 chr1:92976600-92981200 Weak transcription Primary monocytes fromperipheralblood blood
18 chr1:92977400-92993200 Weak transcription Brain Hippocampus Middle brain
19 chr1:92977600-92995000 Weak transcription Fetal Muscle Trunk muscle
20 chr1:92977600-92995800 Weak transcription Right Ventricle heart
21 chr1:92977600-93010600 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr1:92977600-93013200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:92977800-92986800 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr1:92977800-92987400 Weak transcription Fetal Muscle Leg muscle
25 chr1:92977800-92995000 Weak transcription Lung lung
26 chr1:92978000-92982800 Weak transcription Adipose Nuclei Adipose
27 chr1:92978000-92995600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:92978600-92982200 Strong transcription Liver Liver
29 chr1:92978800-92991600 Weak transcription Fetal Intestine Small intestine
30 chr1:92979400-92982200 Enhancers Primary neutrophils fromperipheralblood blood
31 chr1:92979600-92992600 Weak transcription Left Ventricle heart
32 chr1:92979600-92993000 Weak transcription Placenta Placenta
33 chr1:92979600-93002200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:92980400-92982200 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr1:92980400-92982600 Enhancers Dnd41 blood
36 chr1:92980600-92981000 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr1:92980600-92982600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:92980600-92983200 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015