The 2.0 version of rSNPBase

Variant report

Variant rs12076954
Chromosome Location chr1:92941994-92941995
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92925600-92946000 Weak transcription Right Atrium heart
2 chr1:92930800-92944400 Weak transcription Spleen Spleen
3 chr1:92938800-92943800 Enhancers Primary T killer memory cells from peripheral blood blood
4 chr1:92939000-92944600 Enhancers Primary T helper naive cells fromperipheralblood blood
5 chr1:92939200-92942600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr1:92939200-92943600 Enhancers GM12878-XiMat blood
7 chr1:92939400-92943600 Enhancers Primary T helper cells fromperipheralblood blood
8 chr1:92939400-92944600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:92939400-92945800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
10 chr1:92939600-92942200 Enhancers Primary hematopoietic stem cells blood
11 chr1:92939600-92944600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:92939800-92943600 Enhancers Primary T helper naive cells from peripheral blood blood
13 chr1:92939800-92945200 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr1:92940000-92947400 Genic enhancers Primary T cells fromperipheralblood blood
15 chr1:92940200-92943400 Genic enhancers Primary hematopoietic stem cells short term culture blood
16 chr1:92940600-92942200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
17 chr1:92940600-92942200 Strong transcription HepG2 liver
18 chr1:92940800-92944800 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr1:92941000-92942000 Strong transcription Pancreas Pancrea
20 chr1:92941200-92942200 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
21 chr1:92941200-92942800 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
22 chr1:92941200-92944400 Genic enhancers Primary T cells from cord blood blood
23 chr1:92941400-92942000 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
24 chr1:92941400-92942200 Bivalent Enhancer H1 Cell Line embryonic stem cell
25 chr1:92941400-92942200 Bivalent Enhancer iPS DF 6.9 Cell Line embryonic stem cell
26 chr1:92941400-92942200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr1:92941400-92942600 Enhancers Primary monocytes fromperipheralblood blood
28 chr1:92941600-92942200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:92941600-92942200 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
30 chr1:92941600-92942200 Enhancers Duodenum Mucosa Duodenum
31 chr1:92941600-92942600 Enhancers Primary T regulatory cells fromperipheralblood blood
32 chr1:92941600-92942800 Enhancers Primary B cells from cord blood blood
33 chr1:92941600-92944200 Genic enhancers Fetal Thymus thymus
34 chr1:92941800-92942000 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
35 chr1:92941800-92942000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:92941800-92942000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:92941800-92942000 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr1:92941800-92942000 Bivalent Enhancer Fetal Muscle Trunk muscle
39 chr1:92941800-92942000 Bivalent Enhancer Fetal Muscle Leg muscle
40 chr1:92941800-92942200 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
41 chr1:92941800-92942200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
42 chr1:92941800-92942200 Enhancers Placenta Placenta
43 chr1:92941800-92942200 Genic enhancers Dnd41 blood
44 chr1:92941800-92942400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
45 chr1:92941800-92942800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
46 chr1:92941800-92942800 Active TSS Thymus Thymus
47 chr1:92941800-92943000 Enhancers Primary T helper 17 cells PMA-I stimulated --
48 chr1:92941800-92943200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr1:92941800-92944800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:92941800-92946000 Weak transcription Gastric stomach

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Last update: Aug 31, 2015