The 2.0 version of rSNPBase

Variant report

Variant rs12090736
Chromosome Location chr1:94159695-94159696
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94148200-94167200 Weak transcription Right Atrium heart
2 chr1:94153800-94171600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:94155200-94159800 Enhancers Fetal Intestine Large intestine
4 chr1:94155200-94159800 Enhancers HepG2 liver
5 chr1:94155600-94171000 Weak transcription H9 Cell Line embryonic stem cell
6 chr1:94156400-94161200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:94156400-94162400 Enhancers Primary B cells from peripheral blood blood
8 chr1:94156600-94160600 Enhancers Fetal Muscle Leg muscle
9 chr1:94156600-94161600 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr1:94156600-94162200 Enhancers Placenta Placenta
11 chr1:94156800-94160200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:94156800-94161000 Enhancers HSMMtube muscle
13 chr1:94156800-94161400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:94156800-94162200 Enhancers Primary B cells from cord blood blood
15 chr1:94157000-94160600 Enhancers Fetal Muscle Trunk muscle
16 chr1:94157000-94160800 Enhancers Lung lung
17 chr1:94157200-94160400 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr1:94157200-94165400 Weak transcription Pancreas Pancrea
19 chr1:94157400-94159800 Flanking Active TSS A549 lung
20 chr1:94157400-94160200 Enhancers HUVEC blood vessel
21 chr1:94157400-94167600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr1:94157600-94160400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:94157600-94160800 Flanking Active TSS Hela-S3 cervix
24 chr1:94157600-94161000 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:94157600-94161200 Enhancers Skeletal Muscle Female skeletal muscle
26 chr1:94157800-94160600 Flanking Active TSS NHEK skin
27 chr1:94158000-94160600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:94158200-94162000 Enhancers Placenta Amnion Placenta Amnion
29 chr1:94158200-94162400 Enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr1:94158400-94160600 Enhancers Aorta Aorta
31 chr1:94158400-94165200 Weak transcription Brain Hippocampus Middle brain
32 chr1:94158400-94166600 Weak transcription Gastric stomach
33 chr1:94158400-94168200 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr1:94158800-94160200 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr1:94158800-94160400 Flanking Active TSS HMEC breast
36 chr1:94158800-94160400 Enhancers NHLF lung
37 chr1:94158800-94160600 Enhancers Right Ventricle heart
38 chr1:94158800-94160600 Weak transcription Stomach Mucosa stomach
39 chr1:94158800-94161000 Weak transcription Adipose Nuclei Adipose
40 chr1:94158800-94162600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr1:94158800-94166400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr1:94159000-94160000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:94159000-94160600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:94159000-94160800 Enhancers Osteobl bone
45 chr1:94159000-94161400 Weak transcription Duodenum Mucosa Duodenum
46 chr1:94159000-94161800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:94159000-94173600 Weak transcription Fetal Intestine Small intestine
48 chr1:94159200-94159800 Enhancers Left Ventricle heart
49 chr1:94159200-94160000 Flanking Active TSS HSMM muscle
50 chr1:94159200-94160200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015