Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TBP	chr1:71171909-71172677	H1-hESC	embryonic stem cell:	n/a	n/a
2	CHD2	chr1:71171841-71172609	H1-hESC	embryonic stem cell:	n/a	n/a
3	MAX	chr1:71171896-71172707	H1-hESC	embryonic stem cell:	n/a	n/a
4	POLR2A	chr1:71171845-71172612	H1-hESC	embryonic stem cell:	n/a	n/a
5	POLR2A	chr1:71171895-71172587	H1-hESC	embryonic stem cell:	n/a	n/a
6	YY1	chr1:71171806-71172694	H1-hESC	embryonic stem cell:	n/a	n/a
7	POLR2A	chr1:71171798-71172849	H1-hESC	embryonic stem cell:	n/a	n/a
8	NRF1	chr1:71171866-71172063	H1-hESC	embryonic stem cell:	n/a	n/a
9	YY1	chr1:71171891-71172586	H1-hESC	embryonic stem cell:	n/a	n/a
10	TAF1	chr1:71171858-71172735	H1-hESC	embryonic stem cell:	n/a	n/a

Variant related genes	Relation type
ENSG00000229051	TF binding region

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11209690	1.00[EUR][1000 genomes]
rs12058271	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12070022	1.00[EUR][1000 genomes]
rs12074313	1.00[EUR][1000 genomes]
rs12096502	1.00[EUR][1000 genomes]
rs12098192	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1577367	1.00[EUR][1000 genomes]
rs17131342	1.00[EUR][1000 genomes]
rs17131396	1.00[ASW][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];1.00[AMR][1000 genomes]
rs17131407	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1932059	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28415396	1.00[EUR][1000 genomes]
rs2992040	1.00[EUR][1000 genomes]
rs72926266	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72928383	1.00[EUR][1000 genomes]
rs72928385	1.00[EUR][1000 genomes]
rs74085288	1.00[EUR][1000 genomes]
rs7516046	1.00[EUR][1000 genomes]
rs7544159	1.00[EUR][1000 genomes]
rs9662819	1.00[EUR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71171600-71172800	Active TSS	Duodenum Smooth Muscle	Duodenum
2	chr1:71171800-71172000	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr1:71171800-71172000	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr1:71171800-71172000	Bivalent Enhancer	Brain Cingulate Gyrus	brain
5	chr1:71171800-71172000	Enhancers	Fetal Muscle Trunk	muscle
6	chr1:71171800-71172000	Enhancers	Pancreas	Pancrea
7	chr1:71171800-71172400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
8	chr1:71171800-71172800	Active TSS	H1 Cell Line	embryonic stem cell
9	chr1:71171800-71172800	Active TSS	HUES64 Cell Line	embryonic stem cell
10	chr1:71171800-71172800	Active TSS	iPS-20b Cell Line	embryonic stem cell
11	chr1:71171800-71172800	Active TSS	Right Ventricle	heart
12	chr1:71171800-71173000	Active TSS	ES-I3 Cell Line	embryonic stem cell
13	chr1:71171800-71173000	Active TSS	iPS-15b Cell Line	embryonic stem cell
14	chr1:71171800-71173000	Active TSS	Fetal Kidney	kidney
15	chr1:71171800-71173200	Active TSS	Pancreatic Islets	Pancreatic Islet

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