Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:80192745..80194874-chr16:80195006..80196730,2	K562	blood:
2	chr16:80194118..80196698-chr16:80201674..80203282,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10048095	0.88[AMR][1000 genomes]
rs10514490	0.82[AMR][1000 genomes]
rs12102710	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12103219	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13335223	0.88[AMR][1000 genomes]
rs13335540	0.88[AMR][1000 genomes]
rs13338017	0.88[AMR][1000 genomes]
rs16944275	0.82[AMR][1000 genomes]
rs16952569	1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs16952593	0.83[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs16952595	0.94[AMR][1000 genomes]
rs16952612	0.82[ASN][1000 genomes]
rs1862698	1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1871208	0.90[ASN][1000 genomes]
rs1904190	0.82[AMR][1000 genomes]
rs2069011	0.88[AMR][1000 genomes]
rs28396536	0.94[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4889113	0.81[ASN][1000 genomes]
rs4889114	0.83[ASN][1000 genomes]
rs4889117	0.82[ASN][1000 genomes]
rs4889118	0.84[ASN][1000 genomes]
rs57172347	0.80[AFR][1000 genomes]
rs57251439	0.82[AMR][1000 genomes]
rs6564742	0.99[ASN][1000 genomes]
rs6564743	0.88[ASN][1000 genomes]
rs7191109	0.82[AMR][1000 genomes]
rs74028037	0.80[ASN][1000 genomes]
rs74028046	0.82[AMR][1000 genomes]
rs74028051	0.82[AMR][1000 genomes]
rs7499082	0.80[ASN][1000 genomes]
rs8044077	0.85[ASN][1000 genomes]
rs9921356	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9931668	0.80[AFR][1000 genomes]
rs9934786	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833298	chr16:80122337-80314603	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1055982	chr16:80151604-80202923	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:80186600-80197600	Weak transcription	HSMMtube	muscle
2	chr16:80192800-80197600	Weak transcription	Pancreas	Pancrea
3	chr16:80193200-80199600	Weak transcription	A549	lung
4	chr16:80193400-80197600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr16:80193400-80197800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr16:80193400-80197800	Weak transcription	Osteobl	bone
7	chr16:80193400-80199200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr16:80193600-80197400	Weak transcription	HSMM	muscle
9	chr16:80193600-80197600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr16:80193600-80197600	Weak transcription	NH-A	brain
11	chr16:80193600-80197800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr16:80193600-80201400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr16:80193600-80207600	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr16:80193800-80201400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr16:80196200-80197000	Enhancers	Fetal Kidney	kidney

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