Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10514487	0.95[EUR][1000 genomes]
rs12102687	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12102710	0.82[ASN][1000 genomes]
rs12103219	0.82[ASN][1000 genomes]
rs12598278	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16952610	0.81[EUR][1000 genomes]
rs16952612	0.81[EUR][1000 genomes]
rs1871208	0.84[AMR][1000 genomes]
rs4889113	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs4889114	0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4889117	0.81[EUR][1000 genomes]
rs4889118	0.81[EUR][1000 genomes]
rs61540470	0.81[EUR][1000 genomes]
rs6564742	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6564743	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs8044077	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs8045802	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8060581	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9921356	0.94[ASN][1000 genomes]
rs9934115	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9941114	0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833298	chr16:80122337-80314603	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1055982	chr16:80151604-80202923	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv17541	chr16:80191183-80191913	Enhancers Weak transcription	lncRNA	n/a	inside rSNPs	diseases
4	esv15881	chr16:80191198-80193029	Weak transcription Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:80186400-80191800	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr16:80186400-80191800	Weak transcription	NH-A	brain
3	chr16:80186600-80191800	Weak transcription	Osteobl	bone
4	chr16:80186600-80192600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr16:80186600-80197600	Weak transcription	HSMMtube	muscle
6	chr16:80191200-80193600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr16:80191600-80193600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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