The 2.0 version of rSNPBase

Variant report

Variant rs12116650
Chromosome Location chr1:169761617-169761618
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169750800-169762800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr1:169751600-169762600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:169753600-169763000 Weak transcription HMEC breast
4 chr1:169756400-169762400 Weak transcription Fetal Brain Male brain
5 chr1:169756600-169762600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:169757000-169762400 Weak transcription Fetal Thymus thymus
7 chr1:169757400-169763000 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:169757400-169763000 Weak transcription Thymus Thymus
9 chr1:169757400-169763200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr1:169757600-169762200 Weak transcription Fetal Intestine Small intestine
11 chr1:169757600-169763000 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr1:169758000-169762800 Weak transcription Primary B cells from cord blood blood
13 chr1:169758200-169763200 Weak transcription Adipose Nuclei Adipose
14 chr1:169758200-169763200 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:169758600-169763000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:169758600-169763200 Weak transcription Brain Hippocampus Middle brain
17 chr1:169758600-169763200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:169758600-169763400 Weak transcription Gastric stomach
19 chr1:169758800-169762200 Weak transcription Aorta Aorta
20 chr1:169758800-169762400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:169758800-169763000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:169758800-169763000 Weak transcription Rectal Smooth Muscle rectum
23 chr1:169758800-169763200 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:169758800-169763200 Weak transcription HSMM muscle
25 chr1:169758800-169763600 Weak transcription Spleen Spleen
26 chr1:169759000-169762600 Weak transcription Brain Germinal Matrix brain
27 chr1:169759000-169762800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr1:169759000-169763000 Weak transcription Duodenum Mucosa Duodenum
29 chr1:169759000-169763000 Weak transcription A549 lung
30 chr1:169759200-169763000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr1:169759200-169763200 Weak transcription Ovary ovary
32 chr1:169759200-169763200 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr1:169759400-169762600 Weak transcription Brain Anterior Caudate brain
34 chr1:169759400-169763000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:169759600-169763000 Weak transcription Brain Substantia Nigra brain
36 chr1:169759600-169763200 Weak transcription Pancreas Pancrea
37 chr1:169759800-169763200 Weak transcription Fetal Intestine Large intestine
38 chr1:169759800-169763200 Weak transcription Stomach Smooth Muscle stomach
39 chr1:169760000-169763000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:169760200-169763000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:169760400-169761800 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr1:169760400-169762000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr1:169760400-169762600 Weak transcription Primary T cells fromperipheralblood blood
44 chr1:169760400-169763000 Weak transcription Fetal Stomach stomach
45 chr1:169760400-169763200 Weak transcription H1 Cell Line embryonic stem cell
46 chr1:169760400-169763200 Weak transcription Brain Cingulate Gyrus brain
47 chr1:169760400-169763200 Weak transcription Lung lung
48 chr1:169760400-169763200 Weak transcription Placenta Amnion Placenta Amnion
49 chr1:169760400-169763200 Weak transcription Psoas Muscle Psoas
50 chr1:169760400-169763200 Weak transcription NH-A brain

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Last update: Aug 31, 2015