The 2.0 version of rSNPBase

Variant report

Variant rs12119101
Chromosome Location chr1:94240003-94240004
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94220000-94254200 Weak transcription Aorta Aorta
2 chr1:94234800-94240200 Weak transcription Stomach Smooth Muscle stomach
3 chr1:94235400-94240400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:94235400-94240400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr1:94235600-94240600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:94235600-94240800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr1:94235600-94241600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:94235600-94245200 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:94235600-94245200 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:94235800-94240600 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr1:94235800-94241600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:94235800-94245200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:94235800-94245200 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr1:94236000-94240800 Weak transcription Fetal Muscle Trunk muscle
15 chr1:94236000-94244600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:94236000-94245400 Weak transcription H1 Cell Line embryonic stem cell
17 chr1:94236000-94245400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:94236200-94240600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr1:94236200-94247400 Weak transcription Fetal Intestine Small intestine
20 chr1:94237200-94241000 Enhancers Fetal Muscle Leg muscle
21 chr1:94237400-94241000 Enhancers Skeletal Muscle Male skeletal muscle
22 chr1:94237400-94241000 Enhancers Skeletal Muscle Female skeletal muscle
23 chr1:94239000-94241000 Flanking Active TSS NHEK skin
24 chr1:94239200-94240200 Weak transcription HSMMtube muscle
25 chr1:94239200-94240600 Weak transcription Placenta Placenta
26 chr1:94239400-94242800 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr1:94239400-94245200 Weak transcription Psoas Muscle Psoas
28 chr1:94239600-94242200 Weak transcription HepG2 liver
29 chr1:94239800-94241000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:94240000-94240200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:94240000-94241000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:94240000-94241000 Flanking Active TSS Hela-S3 cervix
33 chr1:94240000-94241000 Flanking Active TSS HMEC breast
34 chr1:94240000-94241000 Enhancers HSMM muscle
35 chr1:94240000-94241200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:94240000-94241200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:94240000-94241200 Enhancers Fetal Stomach stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015