Variant report

Variant	rs12138816
Chromosome Location	chr1:94293396-94293397
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:94279623..94281366-chr1:94292858..94294814,2	MCF-7	breast:

Extended variants
information (count: 261 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:255)

rs_ID	r²[population]
rs10158125	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10158155	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10158448	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10158745	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10443194	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10489601	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164975	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11164976	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11164977	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164979	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11164980	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164981	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164982	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164983	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164984	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164985	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164986	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164987	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164988	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164989	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164990	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164991	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164992	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11164995	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11164997	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11164998	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11164999	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11165000	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11165003	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165004	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165005	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11165006	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165007	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165009	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165014	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11165015	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11165017	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11800779	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11804184	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11808807	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12116529	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12116907	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12117504	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12117532	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12119101	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12119150	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12119418	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12119582	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12121376	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12121389	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12121513	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12122176	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12122531	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12122571	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12122871	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12123641	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12123667	0.98[ASN][1000 genomes]
rs12124077	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12124433	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12125068	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12126015	0.94[EUR][1000 genomes]
rs12126315	0.89[EUR][1000 genomes]
rs12126518	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12126805	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12128184	0.89[EUR][1000 genomes]
rs12128215	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12128353	0.89[EUR][1000 genomes]
rs12128463	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12129080	0.89[EUR][1000 genomes]
rs12130017	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12130369	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12130680	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12131932	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12132025	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12132181	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12132405	0.89[EUR][1000 genomes]
rs12132569	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12132625	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12133653	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12133741	0.82[EUR][1000 genomes]
rs12134159	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12135187	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12137698	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12139144	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12139153	0.89[EUR][1000 genomes]
rs12139541	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12139561	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12139877	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12139968	0.89[EUR][1000 genomes]
rs12140014	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12140344	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12140496	0.94[EUR][1000 genomes]
rs12141014	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12141049	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12141212	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12141335	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12141697	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12142097	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12142384	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12143127	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12143397	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12143845	0.86[EUR][1000 genomes]
rs12143888	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12143950	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12144059	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12144131	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12144135	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12144176	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12144277	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12145046	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12240145	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12402433	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12402802	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12402983	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12404613	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12404896	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12404925	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12405302	0.84[EUR][1000 genomes]
rs12405560	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12405984	0.86[EUR][1000 genomes]
rs12406037	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12406729	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12406885	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12407244	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12407550	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12407732	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12407917	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12407922	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12408089	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12408109	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12408194	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12408402	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12408537	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12408575	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12408629	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12408650	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12408797	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12409459	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12409471	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12410084	0.89[EUR][1000 genomes]
rs12410101	0.89[EUR][1000 genomes]
rs12410106	0.89[EUR][1000 genomes]
rs12410342	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12410692	0.97[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12410985	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12410986	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12411043	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12411056	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12725087	0.89[EUR][1000 genomes]
rs12745866	0.89[EUR][1000 genomes]
rs12745888	0.86[EUR][1000 genomes]
rs17100392	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs17110404	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17110411	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17110423	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17110458	0.81[ASN][1000 genomes]
rs17110469	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17110493	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17110498	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17110526	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17110535	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17110544	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1848	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1851	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1852	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1980084	0.89[EUR][1000 genomes]
rs1985243	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2143996	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2143997	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2391286	0.84[EUR][1000 genomes]
rs28743165	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34028800	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34761423	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3761915	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3935320	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3935334	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4281327	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4348734	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4354545	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4357541	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4394664	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4468172	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4488046	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55897737	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56339503	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs56670109	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56797450	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56872721	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56939682	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56981802	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57288295	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs57397759	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs57451717	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57553733	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs57665774	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs57708386	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs57787039	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs57812682	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs57962863	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs58880811	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59048850	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59873068	0.89[EUR][1000 genomes]
rs59972811	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59994448	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60299665	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs60546652	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60661913	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs60699147	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs60807390	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61024563	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs61244553	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61581292	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61658150	0.89[EUR][1000 genomes]
rs6541395	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6664046	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6671880	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6672089	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6681001	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6684128	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6684389	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6688926	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6688941	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6691888	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6692107	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs717912	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74101503	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs74101510	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74101512	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74101544	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74101547	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74101548	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74101551	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs74101571	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs74101573	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74101576	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74101577	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74101578	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74101687	0.89[EUR][1000 genomes]
rs74101688	0.89[EUR][1000 genomes]
rs74101698	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs74101702	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74104105	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74104130	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74104131	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7515209	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7532168	0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7540800	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7544883	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7546315	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7548162	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7550590	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7553438	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs765920	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs960625	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs960626	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508415	chr1:94256122-94305339	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent Enhancer	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	esv1822452	chr1:94278128-94320233	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	121 gene(s)	inside rSNPs	diseases
3	esv1003322	chr1:94285785-94294520	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv546831	chr1:94288524-94294190	Enhancers Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
5	nsv546832	chr1:94288524-94294492	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	esv1831177	chr1:94288524-94304239	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Strong transcription	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:51 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:94279600-94302800	Weak transcription	Stomach Smooth Muscle	stomach
2	chr1:94283400-94310000	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr1:94283600-94293400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:94284000-94294600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr1:94284200-94306200	Weak transcription	Fetal Muscle Trunk	muscle
6	chr1:94284200-94311200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr1:94284400-94296000	Weak transcription	Fetal Intestine Small	intestine
8	chr1:94286400-94294800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr1:94286600-94295600	Enhancers	Placenta Amnion	Placenta Amnion
10	chr1:94287400-94293600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr1:94287600-94294000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr1:94288800-94293600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr1:94290000-94296400	Enhancers	Placenta	Placenta
14	chr1:94290200-94311400	Weak transcription	Aorta	Aorta
15	chr1:94290800-94293400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr1:94291200-94294800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr1:94291800-94293400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr1:94291800-94293600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr1:94292200-94294200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr1:94292400-94293600	Enhancers	Pancreatic Islets	Pancreatic Islet
21	chr1:94292400-94294200	Enhancers	NHDF-Ad	bronchial
22	chr1:94292400-94294400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr1:94292400-94294800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr1:94292400-94294800	Enhancers	HepG2	liver
25	chr1:94292600-94294000	Enhancers	Fetal Muscle Leg	muscle
26	chr1:94292600-94294800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
27	chr1:94292600-94303200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
28	chr1:94292800-94293400	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr1:94292800-94293400	Enhancers	NH-A	brain
30	chr1:94292800-94294200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr1:94292800-94294200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr1:94292800-94294200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr1:94292800-94294200	Enhancers	A549	lung
34	chr1:94292800-94294800	Enhancers	HSMM	muscle
35	chr1:94292800-94295400	Enhancers	H9 Cell Line	embryonic stem cell
36	chr1:94292800-94295600	Enhancers	H1 Cell Line	embryonic stem cell
37	chr1:94293000-94293400	Enhancers	NHLF	lung
38	chr1:94293000-94293800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr1:94293000-94293800	Enhancers	Osteobl	bone
40	chr1:94293000-94294200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr1:94293000-94294200	Enhancers	Muscle Satellite Cultured Cells	--
42	chr1:94293000-94294800	Enhancers	iPS-20b Cell Line	embryonic stem cell
43	chr1:94293000-94295000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
44	chr1:94293000-94295000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
45	chr1:94293000-94295400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
46	chr1:94293200-94293400	Enhancers	HUES64 Cell Line	embryonic stem cell
47	chr1:94293200-94294600	Weak transcription	HSMMtube	muscle
48	chr1:94293200-94294800	Enhancers	HMEC	breast
49	chr1:94293200-94294800	Enhancers	NHEK	skin
50	chr1:94293200-94295000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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