Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:215329275..215331394-chr1:215332099..215334875,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10864155	1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs12118508	1.00[YRI][hapmap];0.93[AFR][1000 genomes]
rs12126969	1.00[CEU][hapmap];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12127285	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs12132201	0.88[AFR][1000 genomes]
rs12134532	1.00[ASN][1000 genomes]
rs12134808	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12136185	0.88[AFR][1000 genomes]
rs12137544	1.00[CEU][hapmap];1.00[ASN][1000 genomes]
rs12138417	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12145594	1.00[CEU][hapmap];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12146036	1.00[CEU][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17024310	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17024348	0.93[AFR][1000 genomes]
rs1901624	1.00[ASN][1000 genomes]
rs1947364	0.82[CEU][hapmap]
rs2363553	0.82[CEU][hapmap]
rs2885814	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34804996	1.00[ASN][1000 genomes]
rs56720553	0.97[AFR][1000 genomes]
rs57440894	0.87[AFR][1000 genomes]
rs60350537	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6694217	1.00[YRI][hapmap]
rs6703032	1.00[CEU][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7543935	0.93[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873169	chr1:215264486-215453286	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215314000-215333800	Weak transcription	NHDF-Ad	bronchial
2	chr1:215320000-215333600	Weak transcription	Osteobl	bone
3	chr1:215320000-215333800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr1:215323000-215333400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr1:215329800-215333600	Weak transcription	Muscle Satellite Cultured Cells	--

Quick Search: