The 2.0 version of rSNPBase

Variant report

Variant rs12144059
Chromosome Location chr1:94237870-94237871
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94220000-94254200 Weak transcription Aorta Aorta
2 chr1:94233600-94238000 Genic enhancers HMEC breast
3 chr1:94233600-94239000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:94234800-94240000 Weak transcription Fetal Stomach stomach
5 chr1:94234800-94240200 Weak transcription Stomach Smooth Muscle stomach
6 chr1:94235000-94238600 Weak transcription HSMM muscle
7 chr1:94235000-94238600 Weak transcription HSMMtube muscle
8 chr1:94235400-94240000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:94235400-94240400 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:94235400-94240400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:94235600-94239400 Weak transcription Fetal Lung lung
12 chr1:94235600-94240600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:94235600-94240800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr1:94235600-94241600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:94235600-94245200 Weak transcription H9 Cell Line embryonic stem cell
16 chr1:94235600-94245200 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr1:94235800-94240600 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr1:94235800-94241600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:94235800-94245200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:94235800-94245200 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr1:94236000-94238600 Weak transcription HepG2 liver
22 chr1:94236000-94239400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:94236000-94240800 Weak transcription Fetal Muscle Trunk muscle
24 chr1:94236000-94244600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr1:94236000-94245400 Weak transcription H1 Cell Line embryonic stem cell
26 chr1:94236000-94245400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr1:94236200-94240600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:94236200-94247400 Weak transcription Fetal Intestine Small intestine
29 chr1:94237200-94239200 Enhancers Placenta Placenta
30 chr1:94237200-94241000 Enhancers Fetal Muscle Leg muscle
31 chr1:94237400-94239400 Enhancers Psoas Muscle Psoas
32 chr1:94237400-94241000 Enhancers Skeletal Muscle Male skeletal muscle
33 chr1:94237400-94241000 Enhancers Skeletal Muscle Female skeletal muscle
34 chr1:94237600-94238000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:94237600-94238000 Enhancers Left Ventricle heart
36 chr1:94237800-94238000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:94237800-94238000 Enhancers Hela-S3 cervix
38 chr1:94237800-94238800 Weak transcription NHEK skin

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Last update: Aug 31, 2015