The 2.0 version of rSNPBase

Variant report

Variant rs12144176
Chromosome Location chr1:94305641-94305642
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94283400-94310000 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr1:94284200-94306200 Weak transcription Fetal Muscle Trunk muscle
3 chr1:94284200-94311200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:94290200-94311400 Weak transcription Aorta Aorta
5 chr1:94295400-94310000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:94298200-94307000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:94299000-94308600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr1:94299400-94310200 Weak transcription Fetal Muscle Leg muscle
9 chr1:94300600-94309400 Weak transcription Dnd41 blood
10 chr1:94300800-94311600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:94301400-94309600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:94302200-94309600 Weak transcription Placenta Placenta
13 chr1:94302200-94311200 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr1:94302200-94311200 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr1:94302800-94309600 Weak transcription Primary T cells fromperipheralblood blood
16 chr1:94303000-94305800 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr1:94303200-94309200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:94303200-94310200 Weak transcription Stomach Smooth Muscle stomach
19 chr1:94303800-94306000 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr1:94303800-94306800 Weak transcription Spleen Spleen
21 chr1:94303800-94311600 Weak transcription Gastric stomach
22 chr1:94304000-94311200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:94304200-94311000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:94304400-94305800 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:94304400-94305800 Enhancers Monocytes-CD14+_RO01746 blood
26 chr1:94304400-94306000 Enhancers NHDF-Ad bronchial
27 chr1:94304400-94306200 Enhancers Primary monocytes fromperipheralblood blood
28 chr1:94304400-94310200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:94304600-94305800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:94304600-94306400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:94304800-94305800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:94304800-94305800 Enhancers NH-A brain
33 chr1:94304800-94306200 Enhancers HMEC breast
34 chr1:94304800-94306400 Enhancers Muscle Satellite Cultured Cells --
35 chr1:94304800-94306400 Enhancers NHLF lung
36 chr1:94304800-94307000 Enhancers Hela-S3 cervix
37 chr1:94305000-94305800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:94305000-94306000 Enhancers HSMM muscle
39 chr1:94305000-94306600 Enhancers Placenta Amnion Placenta Amnion
40 chr1:94305000-94311000 Weak transcription Left Ventricle heart
41 chr1:94305200-94305800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:94305200-94306200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:94305200-94306400 Enhancers Osteobl bone
44 chr1:94305200-94306800 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:94305400-94305800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:94305400-94306000 Enhancers A549 lung
47 chr1:94305400-94309800 Weak transcription Brain Inferior Temporal Lobe brain
48 chr1:94305600-94305800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:94305600-94308200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr1:94305600-94310000 Weak transcription NHEK skin

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Last update: Aug 31, 2015