The 2.0 version of rSNPBase

Variant report

Variant rs12161809
Chromosome Location chr12:50936937-50936938
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:50911600-50939800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:50918800-50938400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr12:50920200-50939600 Weak transcription Fetal Heart heart
4 chr12:50920800-50939400 Weak transcription Fetal Brain Female brain
5 chr12:50920800-50939800 Weak transcription Fetal Brain Male brain
6 chr12:50920800-50962400 Weak transcription Stomach Smooth Muscle stomach
7 chr12:50921000-50939400 Weak transcription Fetal Muscle Trunk muscle
8 chr12:50921000-50940200 Weak transcription Rectal Smooth Muscle rectum
9 chr12:50921200-50939800 Weak transcription Brain Germinal Matrix brain
10 chr12:50923400-50939800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr12:50923600-50939600 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr12:50926600-50939200 Weak transcription Fetal Muscle Leg muscle
13 chr12:50927200-50957600 Weak transcription Fetal Lung lung
14 chr12:50927400-50938600 Weak transcription Duodenum Mucosa Duodenum
15 chr12:50927400-50939200 Weak transcription Psoas Muscle Psoas
16 chr12:50927400-50939600 Weak transcription Thymus Thymus
17 chr12:50927400-50939800 Weak transcription Colon Smooth Muscle Colon
18 chr12:50927400-50944400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr12:50927400-50948800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr12:50927400-50951000 Weak transcription Dnd41 blood
21 chr12:50927400-50961800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr12:50927600-50941600 Weak transcription Pancreas Pancrea
23 chr12:50927600-50950000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr12:50927600-50957200 Weak transcription Spleen Spleen
25 chr12:50927800-50947600 Weak transcription Fetal Thymus thymus
26 chr12:50927800-50961800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr12:50929000-50939600 Weak transcription Ovary ovary
28 chr12:50929200-50939600 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr12:50929200-50943800 Weak transcription Placenta Placenta
30 chr12:50930600-50948600 Weak transcription Left Ventricle heart
31 chr12:50931600-50939600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr12:50932000-50937200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr12:50932000-50945200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr12:50932000-50957800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr12:50932000-50958000 Weak transcription Adipose Nuclei Adipose
36 chr12:50932200-50938800 Weak transcription K562 blood
37 chr12:50932200-50939200 Weak transcription Small Intestine intestine
38 chr12:50932200-50939400 Weak transcription Osteobl bone
39 chr12:50932200-50939800 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr12:50932200-50948400 Weak transcription Primary T cells from cord blood blood
41 chr12:50932200-50948600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr12:50932200-50961800 Weak transcription Right Ventricle heart
43 chr12:50932400-50939800 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr12:50932400-50941600 Weak transcription Colonic Mucosa Colon
45 chr12:50932400-50944400 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr12:50932400-50949000 Weak transcription Primary hematopoietic stem cells blood
47 chr12:50932600-50937600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr12:50932800-50939800 Weak transcription Brain Anterior Caudate brain
49 chr12:50932800-50947600 Weak transcription Primary B cells from peripheral blood blood
50 chr12:50932800-50948200 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015