Variant report

Variant	rs12184310
Chromosome Location	chr1:71285916-71285917
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11209706	0.87[CEU][hapmap];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12122560	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12130467	1.00[ASN][1000 genomes]
rs12145361	0.81[EUR][1000 genomes]
rs1327449	1.00[ASN][1000 genomes]
rs1327456	0.91[EUR][1000 genomes]
rs6672081	0.81[CEU][hapmap]
rs6685445	1.00[ASN][1000 genomes]
rs6685546	0.87[CEU][hapmap];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72687007	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1845198	chr1:71274759-71514969	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71283400-71286200	Enhancers	Fetal Heart	heart
2	chr1:71283600-71286200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr1:71285000-71286000	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr1:71285000-71286400	Enhancers	Pancreatic Islets	Pancreatic Islet
5	chr1:71285600-71286400	Enhancers	Primary monocytes fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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