The 2.0 version of rSNPBase

Variant report

Variant rs12199764
Chromosome Location chr6:12036111-12036112
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12017800-12040200 Weak transcription Fetal Brain Male brain
2 chr6:12018400-12039600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr6:12018600-12049400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr6:12018600-12052000 Weak transcription Thymus Thymus
5 chr6:12020800-12037400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr6:12020800-12039400 Weak transcription H9 Cell Line embryonic stem cell
7 chr6:12022000-12037200 Weak transcription Fetal Thymus thymus
8 chr6:12022000-12037600 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr6:12023200-12047800 Weak transcription Fetal Muscle Trunk muscle
10 chr6:12023600-12039200 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr6:12026000-12044800 Weak transcription NHDF-Ad bronchial
12 chr6:12029200-12045000 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr6:12029800-12042800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr6:12030600-12037000 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr6:12030600-12037400 Weak transcription Primary B cells from cord blood blood
16 chr6:12031400-12037200 Weak transcription Primary B cells from peripheral blood blood
17 chr6:12031600-12037000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr6:12032000-12039800 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr6:12032000-12044800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr6:12032000-12044800 Weak transcription NH-A brain
21 chr6:12032000-12047600 Weak transcription Fetal Stomach stomach
22 chr6:12032200-12038000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr6:12032200-12039600 Weak transcription H1 Cell Line embryonic stem cell
24 chr6:12032200-12039600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr6:12032200-12039800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr6:12033200-12036400 Enhancers Primary T helper cells fromperipheralblood blood
27 chr6:12033200-12038000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr6:12033600-12040000 Enhancers Primary T cells from cord blood blood
29 chr6:12033800-12037400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr6:12034200-12037600 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr6:12034400-12039200 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr6:12034400-12045000 Weak transcription HUVEC blood vessel
33 chr6:12034600-12044800 Weak transcription Hela-S3 cervix
34 chr6:12034600-12045000 Weak transcription A549 lung
35 chr6:12034800-12036600 Weak transcription Primary T cells fromperipheralblood blood
36 chr6:12034800-12037800 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr6:12034800-12038000 Weak transcription Primary monocytes fromperipheralblood blood
38 chr6:12034800-12039600 Weak transcription Adipose Nuclei Adipose
39 chr6:12034800-12040000 Weak transcription Fetal Intestine Small intestine
40 chr6:12034800-12047600 Weak transcription Fetal Intestine Large intestine
41 chr6:12034800-12061000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr6:12035000-12036800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr6:12035000-12037200 Weak transcription Primary hematopoietic stem cells blood
44 chr6:12035000-12037600 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr6:12035000-12039200 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr6:12035000-12039400 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr6:12035000-12039600 Weak transcription Psoas Muscle Psoas
48 chr6:12035000-12040000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr6:12035000-12049800 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr6:12035200-12036400 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015