Variant report

Variant rs1220156
Chromosome Location chr18:25556552-25556553
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:25531200-25593600 Weak transcription Fetal Kidney kidney
2 chr18:25536400-25578200 Weak transcription Fetal Brain Male brain
3 chr18:25536800-25574200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr18:25540200-25564600 Weak transcription Ovary ovary
5 chr18:25540800-25564400 Weak transcription Brain Hippocampus Middle brain
6 chr18:25540800-25576400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr18:25542800-25574400 Strong transcription Cortex derived primary cultured neurospheres brain
8 chr18:25544400-25572400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr18:25545400-25564800 Weak transcription HUVEC blood vessel
10 chr18:25545600-25588600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr18:25548600-25557600 Weak transcription Placenta Amnion Placenta Amnion
12 chr18:25548800-25574600 Strong transcription NH-A brain
13 chr18:25549400-25574000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr18:25549600-25556800 Strong transcription Liver Liver
15 chr18:25549600-25557600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr18:25549600-25572000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr18:25550800-25564400 Weak transcription A549 lung
18 chr18:25552400-25556800 Strong transcription HSMM muscle
19 chr18:25552400-25557000 Strong transcription Dnd41 blood
20 chr18:25553000-25566200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr18:25553000-25593600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr18:25553600-25560200 Weak transcription Right Atrium heart
23 chr18:25554200-25557600 Strong transcription HUES64 Cell Line embryonic stem cell
24 chr18:25554400-25571000 Strong transcription Osteobl bone
25 chr18:25554600-25556600 Strong transcription HUES6 Cell Line embryonic stem cell
26 chr18:25554600-25557400 Strong transcription Brain Germinal Matrix brain
27 chr18:25554800-25556800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr18:25555000-25557000 Strong transcription Fetal Brain Female brain
29 chr18:25555000-25571600 Weak transcription HSMMtube muscle
30 chr18:25555400-25556600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
31 chr18:25555400-25556600 Strong transcription Brain Cingulate Gyrus brain
32 chr18:25555400-25558400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr18:25555400-25565400 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr18:25555600-25559200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr18:25555600-25574200 Weak transcription Brain Anterior Caudate brain
36 chr18:25555800-25556600 Strong transcription HepG2 liver
37 chr18:25555800-25562000 Weak transcription Muscle Satellite Cultured Cells --
38 chr18:25556000-25556800 Strong transcription iPS-20b Cell Line embryonic stem cell
39 chr18:25556000-25557000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr18:25556000-25563200 Weak transcription Brain Inferior Temporal Lobe brain
41 chr18:25556200-25558200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr18:25556200-25558200 Weak transcription Left Ventricle heart
43 chr18:25556200-25558400 Weak transcription Right Ventricle heart
44 chr18:25556200-25574600 Weak transcription Brain Angular Gyrus brain
45 chr18:25556200-25586800 Weak transcription Spleen Spleen
46 chr18:25556200-25592800 Weak transcription Aorta Aorta
47 chr18:25556200-25595800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr18:25556400-25556600 Enhancers Fetal Intestine Small intestine
49 chr18:25556400-25557000 Genic enhancers Fetal Heart heart
50 chr18:25556400-25558000 Enhancers Fetal Intestine Large intestine

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