The 2.0 version of rSNPBase

Variant report

Variant rs12210550
Chromosome Location chr6:101245065-101245066
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:101184400-101304600 Weak transcription Hela-S3 cervix
2 chr6:101191400-101277000 Weak transcription Esophagus oesophagus
3 chr6:101212000-101246400 Weak transcription Psoas Muscle Psoas
4 chr6:101212000-101276200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:101212000-101281400 Weak transcription Aorta Aorta
6 chr6:101213600-101256000 Weak transcription Ovary ovary
7 chr6:101213600-101281600 Weak transcription Gastric stomach
8 chr6:101213800-101250800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr6:101213800-101254200 Weak transcription Fetal Thymus thymus
10 chr6:101214800-101281600 Weak transcription Left Ventricle heart
11 chr6:101215200-101247000 Weak transcription Primary monocytes fromperipheralblood blood
12 chr6:101215200-101252600 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr6:101215200-101256200 Weak transcription Osteobl bone
14 chr6:101215200-101263000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr6:101215200-101311400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr6:101215400-101258600 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr6:101223000-101256800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr6:101226000-101281400 Weak transcription HUVEC blood vessel
19 chr6:101232000-101255200 Weak transcription NHLF lung
20 chr6:101233600-101306600 Weak transcription K562 blood
21 chr6:101233800-101265200 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr6:101234400-101254400 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr6:101234600-101260000 Weak transcription Brain Hippocampus Middle brain
24 chr6:101235200-101246000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr6:101235800-101246000 Weak transcription Fetal Muscle Trunk muscle
26 chr6:101236200-101245800 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr6:101236800-101257800 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr6:101237000-101257400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr6:101238000-101251000 Weak transcription Duodenum Mucosa Duodenum
30 chr6:101238000-101296200 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr6:101238800-101257200 Weak transcription HepG2 liver
32 chr6:101239400-101254600 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr6:101239800-101257800 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr6:101240200-101257800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr6:101240400-101266000 Weak transcription Pancreas Pancrea
36 chr6:101240600-101277000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr6:101240800-101245600 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr6:101241400-101250600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:101241600-101276200 Weak transcription Fetal Intestine Large intestine
40 chr6:101241800-101253400 Strong transcription Dnd41 blood
41 chr6:101241800-101276200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr6:101242600-101248400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr6:101242600-101252800 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr6:101242600-101254600 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr6:101242600-101262600 Weak transcription Small Intestine intestine
46 chr6:101242800-101246800 Weak transcription Brain Angular Gyrus brain
47 chr6:101242800-101256800 Weak transcription Colon Smooth Muscle Colon
48 chr6:101243000-101247000 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr6:101243000-101252200 Weak transcription Fetal Muscle Leg muscle
50 chr6:101243200-101245600 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015