Variant report

Variant	rs12232690
Chromosome Location	chr18:30355873-30355874
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1523576	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17738786	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17851892	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62092151	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7232060	0.85[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7234849	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs7241727	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8084642	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8086995	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs8097599	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9946321	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9954239	0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs9959560	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:30352600-30356000	Weak transcription	Colon Smooth Muscle	Colon
2	chr18:30354200-30357200	Weak transcription	Primary B cells from peripheral blood	blood
3	chr18:30354400-30357000	Weak transcription	HepG2	liver
4	chr18:30354600-30357600	Weak transcription	Primary B cells from cord blood	blood
5	chr18:30355000-30356200	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr18:30355200-30356400	Enhancers	HUVEC	blood vessel
7	chr18:30355400-30356000	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr18:30355400-30356000	Enhancers	Dnd41	blood
9	chr18:30355600-30356000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr18:30355800-30356200	Enhancers	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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