Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10508934	0.91[YRI][hapmap];0.82[AFR][1000 genomes]
rs10994652	0.80[YRI][hapmap]
rs12241999	0.80[YRI][hapmap]
rs12242265	0.80[YRI][hapmap]
rs12244405	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12245610	0.80[YRI][hapmap]
rs12247876	0.80[YRI][hapmap]
rs12248117	0.80[YRI][hapmap]
rs12250710	0.80[YRI][hapmap]
rs12252902	0.80[YRI][hapmap]
rs12255568	0.80[YRI][hapmap]
rs12256013	0.80[YRI][hapmap]
rs12257587	0.80[YRI][hapmap]
rs12262186	0.80[YRI][hapmap]
rs12263224	0.80[YRI][hapmap]
rs12268784	0.80[YRI][hapmap]
rs12268905	0.80[YRI][hapmap]
rs12778548	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12783070	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17500776	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17500846	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61856594	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6479769	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7075575	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7077103	0.80[YRI][hapmap]
rs7099856	0.80[YRI][hapmap]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:52631400-52646600	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr10:52641200-52645000	Weak transcription	Pancreas	Pancrea
3	chr10:52642400-52645600	Active TSS	HepG2	liver
4	chr10:52642400-52646400	Weak transcription	Small Intestine	intestine
5	chr10:52642600-52645800	Active TSS	Liver	Liver
6	chr10:52643000-52645600	Active TSS	Fetal Intestine Large	intestine
7	chr10:52643200-52645400	Active TSS	Rectal Mucosa Donor 29	rectum
8	chr10:52643200-52645600	Active TSS	Fetal Intestine Small	intestine
9	chr10:52643400-52645400	Active TSS	Duodenum Mucosa	Duodenum
10	chr10:52643400-52646000	Active TSS	Pancreatic Islets	Pancreatic Islet
11	chr10:52643600-52645800	Active TSS	Rectal Mucosa Donor 31	rectum
12	chr10:52643800-52644800	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr10:52644200-52645400	Active TSS	Duodenum Smooth Muscle	Duodenum
14	chr10:52644200-52645400	Active TSS	Rectal Smooth Muscle	rectum

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