Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ENKUR-5	chr10:25487007-25488838	refGeneNc_2728_NR_027333

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10128299	1.00[CEU][hapmap]
rs10508690	1.00[CEU][hapmap]
rs11014436	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11014454	1.00[CEU][hapmap]
rs11014475	1.00[CEU][hapmap]
rs11014480	1.00[CEU][hapmap]
rs12250636	1.00[CEU][hapmap]
rs12258880	1.00[CEU][hapmap]
rs12263407	1.00[CEU][hapmap]
rs12265296	1.00[CEU][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1339997	1.00[CEU][hapmap]
rs16925493	1.00[CEU][hapmap]
rs16925518	1.00[CEU][hapmap]
rs7074602	1.00[CEU][hapmap]
rs7075587	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7077890	1.00[CEU][hapmap]
rs7080343	1.00[CEU][hapmap]
rs7086178	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7090132	1.00[CEU][hapmap]
rs7099168	1.00[CEU][hapmap]
rs7101272	1.00[CEU][hapmap]
rs74123697	0.86[AMR][1000 genomes]
rs7902783	1.00[CEU][hapmap];0.82[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7903171	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7906676	1.00[CEU][hapmap]
rs7918295	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9988788	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894970	chr10:25385858-25522280	Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv894971	chr10:25403234-25522280	Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2760160	chr10:25473747-25496153	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25487000-25487400	Enhancers	Fetal Brain Male	brain

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