The 2.0 version of rSNPBase

Variant report

Variant rs12285652
Chromosome Location chr11:72108062-72108063
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72065000-72110800 Weak transcription Hela-S3 cervix
2 chr11:72069400-72111400 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr11:72090400-72123000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr11:72091400-72109600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr11:72091400-72111400 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr11:72091600-72119200 Weak transcription Thymus Thymus
7 chr11:72093800-72109400 Weak transcription Pancreas Pancrea
8 chr11:72095200-72112800 Weak transcription Fetal Stomach stomach
9 chr11:72095800-72110600 Weak transcription Dnd41 blood
10 chr11:72096200-72110600 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr11:72098200-72108800 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr11:72099200-72110600 Weak transcription HSMM muscle
13 chr11:72099200-72110800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr11:72099200-72111200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr11:72099200-72111400 Weak transcription HSMMtube muscle
16 chr11:72099200-72111600 Weak transcription Muscle Satellite Cultured Cells --
17 chr11:72099200-72111600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr11:72099200-72112800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr11:72099200-72112800 Weak transcription Fetal Muscle Leg muscle
20 chr11:72099200-72112800 Weak transcription Lung lung
21 chr11:72099200-72115000 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr11:72099200-72115600 Weak transcription NHDF-Ad bronchial
23 chr11:72099200-72122800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr11:72099600-72125000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr11:72099600-72125000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr11:72100000-72109200 Weak transcription Osteobl bone
27 chr11:72100200-72111400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr11:72100400-72117400 Weak transcription HMEC breast
29 chr11:72101400-72111600 Weak transcription Gastric stomach
30 chr11:72102000-72110800 Weak transcription Primary hematopoietic stem cells blood
31 chr11:72102000-72111400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr11:72102400-72111400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr11:72102600-72112600 Weak transcription Fetal Intestine Small intestine
34 chr11:72103400-72109000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr11:72103400-72111400 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr11:72103400-72120000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr11:72103600-72111600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr11:72103600-72111600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr11:72103600-72116000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr11:72104000-72111000 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr11:72104200-72111400 Weak transcription Primary B cells from peripheral blood blood
42 chr11:72104200-72111400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr11:72104200-72111600 Weak transcription Spleen Spleen
44 chr11:72104200-72113600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr11:72104400-72111800 Weak transcription Fetal Muscle Trunk muscle
46 chr11:72105000-72122200 Weak transcription GM12878-XiMat blood
47 chr11:72105400-72124800 Weak transcription A549 lung
48 chr11:72106000-72115800 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr11:72106200-72111600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr11:72106200-72112400 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015