The 2.0 version of rSNPBase

Variant report

Variant rs12290517
Chromosome Location chr11:35363469-35363470
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:35354000-35367800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr11:35354400-35366000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr11:35354600-35366000 Weak transcription Brain Substantia Nigra brain
4 chr11:35357000-35364000 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr11:35359200-35364600 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr11:35359400-35364000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr11:35360000-35364000 Weak transcription K562 blood
8 chr11:35361600-35364400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr11:35361600-35364600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr11:35361800-35365800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr11:35361800-35367800 Weak transcription Brain Hippocampus Middle brain
12 chr11:35361800-35368200 Weak transcription Hela-S3 cervix
13 chr11:35362000-35366200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr11:35362000-35366200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr11:35362000-35366200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr11:35362000-35368000 Weak transcription Left Ventricle heart
17 chr11:35362200-35365400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr11:35362200-35366200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr11:35362200-35366200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr11:35362200-35366800 Weak transcription Right Atrium heart
21 chr11:35362200-35367800 Weak transcription Brain Anterior Caudate brain
22 chr11:35362400-35368400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr11:35362600-35366000 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr11:35362600-35366200 Weak transcription Stomach Smooth Muscle stomach
25 chr11:35362600-35372800 Weak transcription NHLF lung
26 chr11:35362800-35366000 Weak transcription Psoas Muscle Psoas
27 chr11:35362800-35366600 Weak transcription NHDF-Ad bronchial
28 chr11:35362800-35366800 Weak transcription Pancreas Pancrea
29 chr11:35363000-35363600 Enhancers Primary T cells from cord blood blood
30 chr11:35363000-35369200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr11:35363200-35364400 Enhancers Primary T helper naive cells fromperipheralblood blood
32 chr11:35363200-35366000 Enhancers Primary hematopoietic stem cells blood
33 chr11:35363200-35366200 Weak transcription Adipose Nuclei Adipose
34 chr11:35363200-35368600 Weak transcription Liver Liver
35 chr11:35363400-35364400 Enhancers Primary T helper cells PMA-I stimulated --
36 chr11:35363400-35366000 Weak transcription HepG2 liver
37 chr11:35363400-35367200 Enhancers Primary T helper naive cells from peripheral blood blood
38 chr11:35363400-35367200 Enhancers Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015